14 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_00742	Nucleoporin Nup157/170. (1396 aa)
	VDAG_00412	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family. (544 aa)
	VDAG_01219	Nucleoporin NIC96. (1177 aa)
	VDAG_01848	Poly(A)+ RNA export protein. (358 aa)
	VDAG_02729	Nucleoporin nup44. (358 aa)
	VDAG_03000	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (901 aa)
	VDAG_05438	TPR_MLP1_2 domain-containing protein. (2093 aa)
	VDAG_05737	Nup188_C domain-containing protein. (1795 aa)
	VDAG_05897	Uncharacterized protein. (1665 aa)
	VDAG_07456	Nucleoporin nup189. (1956 aa)
	VDAG_08541	Uncharacterized protein. (1407 aa)
	VDAG_08795	Uncharacterized protein. (1200 aa)
	VDAG_10111	Transport protein SEC13; Belongs to the WD repeat SEC13 family. (288 aa)
	VDAG_10488	ELYS domain-containing protein. (293 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_00412	VDAG_00742	G2WS79	G2WQV0	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin Nup157/170.	0.993
VDAG_00412	VDAG_01219	G2WS79	G2WTU6	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin NIC96.	0.994
VDAG_00412	VDAG_01848	G2WS79	G2WW62	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Poly(A)+ RNA export protein.	0.978
VDAG_00412	VDAG_02729	G2WS79	G2WWV0	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin nup44.	0.978
VDAG_00412	VDAG_03000	G2WS79	G2WZX7	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
VDAG_00412	VDAG_05438	G2WS79	G2X5D3	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	TPR_MLP1_2 domain-containing protein.	0.545
VDAG_00412	VDAG_05737	G2WS79	G2X6F5	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nup188_C domain-containing protein.	0.419
VDAG_00412	VDAG_05897	G2WS79	G2X6W5	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.992
VDAG_00412	VDAG_07456	G2WS79	G2XB26	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin nup189.	0.976
VDAG_00412	VDAG_08541	G2WS79	G2XEF6	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.999
VDAG_00412	VDAG_10111	G2WS79	G2XIR3	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	0.999
VDAG_00412	VDAG_10488	G2WS79	G2XK06	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	ELYS domain-containing protein.	0.973
VDAG_00742	VDAG_00412	G2WQV0	G2WS79	Nucleoporin Nup157/170.	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	0.993
VDAG_00742	VDAG_01219	G2WQV0	G2WTU6	Nucleoporin Nup157/170.	Nucleoporin NIC96.	0.999
VDAG_00742	VDAG_01848	G2WQV0	G2WW62	Nucleoporin Nup157/170.	Poly(A)+ RNA export protein.	0.977
VDAG_00742	VDAG_02729	G2WQV0	G2WWV0	Nucleoporin Nup157/170.	Nucleoporin nup44.	0.997
VDAG_00742	VDAG_03000	G2WQV0	G2WZX7	Nucleoporin Nup157/170.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.993
VDAG_00742	VDAG_05438	G2WQV0	G2X5D3	Nucleoporin Nup157/170.	TPR_MLP1_2 domain-containing protein.	0.912
VDAG_00742	VDAG_05737	G2WQV0	G2X6F5	Nucleoporin Nup157/170.	Nup188_C domain-containing protein.	0.952
VDAG_00742	VDAG_05897	G2WQV0	G2X6W5	Nucleoporin Nup157/170.	Uncharacterized protein.	0.999