STRINGSTRING
VDAG_00404 VDAG_00404 VDAG_02251 VDAG_02251 VDAG_03995 VDAG_03995 VDAG_04373 VDAG_04373 VDAG_04144 VDAG_04144 VDAG_04635 VDAG_04635 VDAG_06650 VDAG_06650 VDAG_06652 VDAG_06652 VDAG_07490 VDAG_07490 VDAG_07970 VDAG_07970 VDAG_08623 VDAG_08623 VDAG_08781 VDAG_08781 VDAG_09232 VDAG_09232 VDAG_10148 VDAG_10148 VDAG_10206 VDAG_10206
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_00404Cell division control protein. (877 aa)
VDAG_02251DNA primase; Belongs to the eukaryotic-type primase small subunit family. (495 aa)
VDAG_03995DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2218 aa)
VDAG_04373DNA replication complex GINS protein psf1. (217 aa)
VDAG_04144DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (221 aa)
VDAG_04635DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (511 aa)
VDAG_06650Uncharacterized protein. (309 aa)
VDAG_06652DNA polymerase. (1474 aa)
VDAG_07490Minichromosome loss protein. (855 aa)
VDAG_07970DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (249 aa)
VDAG_08623DNA polymerase epsilon subunit B. (807 aa)
VDAG_08781Uncharacterized protein. (148 aa)
VDAG_09232DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (658 aa)
VDAG_10148DNA helicase; Belongs to the MCM family. (937 aa)
VDAG_10206DNA replication complex GINS protein PSF3. (182 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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