STRINGSTRING
VDAG_02229 VDAG_02229 katG katG VDAG_04481 VDAG_04481 katG-2 katG-2 VDAG_05675 VDAG_05675 VDAG_05826 VDAG_05826 VDAG_05831 VDAG_05831 VDAG_10058 VDAG_10058
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_02229Aspartate aminotransferase. (412 aa)
katGCatalase-peroxidase; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (762 aa)
VDAG_04481Aromatic amino acid aminotransferase. (562 aa)
katG-2Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity. Confers resistance to H(2)O(2) in hyphae. May play an antioxidative role in fungal defense against the host-produced H(2)O(2) (oxidative burst) at the early stage of plant infection. (772 aa)
VDAG_05675Prephenate dehydrogenase. (392 aa)
VDAG_05826PDT domain-containing protein. (361 aa)
VDAG_05831Phenylalanine ammonia-lyase. (644 aa)
VDAG_10058Phenylalanine ammonia-lyase. (695 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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