STRINGSTRING
VDAG_00022 VDAG_00022 VDAG_00131 VDAG_00131 VDAG_01131 VDAG_01131 VDAG_01272 VDAG_01272 VDAG_06362 VDAG_06362
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_00022Ornithine decarboxylase antizyme. (266 aa)
VDAG_00131Spermidine synthase. (95 aa)
VDAG_01131Proclavaminate amidinohydrolase; Belongs to the arginase family. (345 aa)
VDAG_01272Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (453 aa)
VDAG_06362Guanidinobutyrase; Belongs to the arginase family. (409 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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