STRINGSTRING
VDAG_04264 VDAG_04264 VDAG_00760 VDAG_00760 VDAG_00373 VDAG_00373 VDAG_01132 VDAG_01132 VDAG_01181 VDAG_01181 VDAG_01329 VDAG_01329 VDAG_01669 VDAG_01669 VDAG_01686 VDAG_01686 VDAG_01688 VDAG_01688 VDAG_01960 VDAG_01960 VDAG_02758 VDAG_02758 VDAG_02771 VDAG_02771 VDAG_02865 VDAG_02865 VDAG_02419 VDAG_02419 VDAG_03123 VDAG_03123 VDAG_03364 VDAG_03364 VDAG_03509 VDAG_03509 VDAG_03063 VDAG_03063 VDAG_03680 VDAG_03680 VDAG_05247 VDAG_05247 VDAG_05301 VDAG_05301 VDAG_05356 VDAG_05356 VDAG_05715 VDAG_05715 VDAG_06468 VDAG_06468 VDAG_06567 VDAG_06567 VDAG_10305 VDAG_10305 VDAG_10255 VDAG_10255 VDAG_10139 VDAG_10139 VDAG_10009 VDAG_10009 VDAG_08873 VDAG_08873 VDAG_08828 VDAG_08828 VDAG_08765 VDAG_08765 VDAG_08679 VDAG_08679 VDAG_08630 VDAG_08630 VDAG_08504 VDAG_08504 VDAG_07999 VDAG_07999 VDAG_07495 VDAG_07495 VDAG_07420 VDAG_07420 VDAG_06693 VDAG_06693
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_04264U2 snRNP component prp10. (1223 aa)
VDAG_00760PWI domain-containing protein. (687 aa)
VDAG_00373TPR repeat-containing protein. (577 aa)
VDAG_01132Pre-mRNA-processing factor 17. (531 aa)
VDAG_01181Isoflavone reductase family protein. (305 aa)
VDAG_01329U4/U6.U5 tri-snRNP-associated protein. (549 aa)
VDAG_01669Protein kinase dsk1. (521 aa)
VDAG_01686Protein kinase domain-containing protein. (260 aa)
VDAG_01688Protein kinase domain-containing protein. (343 aa)
VDAG_01960KH domain-containing protein. (524 aa)
VDAG_02758RNA-binding motif protein. (333 aa)
VDAG_02771Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (391 aa)
VDAG_02865Serine/threonine-protein kinase SRPK3. (285 aa)
VDAG_02419Serine/threonine-protein kinase SRPK2. (463 aa)
VDAG_03123Pre-mRNA-processing factor 39. (576 aa)
VDAG_03364Serine/threonine protein kinase. (421 aa)
VDAG_03509Splicing factor 3A subunit 2. (241 aa)
VDAG_03063U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (589 aa)
VDAG_03680Protein kinase domain-containing protein. (461 aa)
VDAG_05247Protein kinase domain-containing protein. (418 aa)
VDAG_05301LUC7 protein. (271 aa)
VDAG_05356Protein kinase domain-containing protein. (371 aa)
VDAG_05715Uncharacterized protein. (234 aa)
VDAG_06468NmrA domain-containing protein. (305 aa)
VDAG_06567Pre-mRNA-splicing factor ini1. (110 aa)
VDAG_10305Pre-mRNA-splicing factor spp42. (2874 aa)
VDAG_10255Uncharacterized protein. (93 aa)
VDAG_10139Protein kinase domain-containing protein. (213 aa)
VDAG_10009Splicing factor 3B subunit 2. (534 aa)
VDAG_08873IDC1 protein. (1580 aa)
VDAG_08828Pre-mRNA-splicing factor clf1. (673 aa)
VDAG_08765Uncharacterized protein. (148 aa)
VDAG_08679U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (179 aa)
VDAG_08630F-box domain-containing protein. (524 aa)
VDAG_08504Uncharacterized protein. (365 aa)
VDAG_07999Protein kinase domain-containing protein. (156 aa)
VDAG_07495Serine/threonine-protein kinase SRPK3. (381 aa)
VDAG_07420GST N-terminal domain-containing protein. (373 aa)
VDAG_06693Uncharacterized protein. (1082 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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