9 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_08418	Cell cycle control protein cwf16. (247 aa)
	VDAG_04191	Pre-mRNA-splicing factor brr2. (2213 aa)
	VDAG_03726	Uncharacterized protein. (305 aa)
	VDAG_00164	Uncharacterized protein. (397 aa)
	VDAG_03244	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (963 aa)
	VDAG_02645	Pre-mRNA-splicing factor ISY1. (245 aa)
	VDAG_00165	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (973 aa)
	VDAG_01132	Pre-mRNA-processing factor 17. (531 aa)
	VDAG_10305	Pre-mRNA-splicing factor spp42. (2874 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_00164	VDAG_01132	G2WRI1	G2WTK9	Uncharacterized protein.	Pre-mRNA-processing factor 17.	0.939
VDAG_00164	VDAG_02645	G2WRI1	G2WYG3	Uncharacterized protein.	Pre-mRNA-splicing factor ISY1.	0.610
VDAG_00164	VDAG_03244	G2WRI1	G2WZ02	Uncharacterized protein.	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.	0.857
VDAG_00164	VDAG_03726	G2WRI1	G2X0E7	Uncharacterized protein.	Uncharacterized protein.	0.507
VDAG_00164	VDAG_04191	G2WRI1	G2X2Z7	Uncharacterized protein.	Pre-mRNA-splicing factor brr2.	0.870
VDAG_00164	VDAG_08418	G2WRI1	G2XE36	Uncharacterized protein.	Cell cycle control protein cwf16.	0.636
VDAG_00164	VDAG_10305	G2WRI1	G2XJP2	Uncharacterized protein.	Pre-mRNA-splicing factor spp42.	0.858
VDAG_00165	VDAG_01132	G2WRI2	G2WTK9	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Pre-mRNA-processing factor 17.	0.950
VDAG_00165	VDAG_02645	G2WRI2	G2WYG3	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Pre-mRNA-splicing factor ISY1.	0.610
VDAG_00165	VDAG_03244	G2WRI2	G2WZ02	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.	0.867
VDAG_00165	VDAG_03726	G2WRI2	G2X0E7	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Uncharacterized protein.	0.507
VDAG_00165	VDAG_04191	G2WRI2	G2X2Z7	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Pre-mRNA-splicing factor brr2.	0.983
VDAG_00165	VDAG_08418	G2WRI2	G2XE36	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Cell cycle control protein cwf16.	0.636
VDAG_00165	VDAG_10305	G2WRI2	G2XJP2	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	Pre-mRNA-splicing factor spp42.	0.877
VDAG_01132	VDAG_00164	G2WTK9	G2WRI1	Pre-mRNA-processing factor 17.	Uncharacterized protein.	0.939
VDAG_01132	VDAG_00165	G2WTK9	G2WRI2	Pre-mRNA-processing factor 17.	Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16.	0.950
VDAG_01132	VDAG_02645	G2WTK9	G2WYG3	Pre-mRNA-processing factor 17.	Pre-mRNA-splicing factor ISY1.	0.993
VDAG_01132	VDAG_03244	G2WTK9	G2WZ02	Pre-mRNA-processing factor 17.	Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.	0.999
VDAG_01132	VDAG_03726	G2WTK9	G2X0E7	Pre-mRNA-processing factor 17.	Uncharacterized protein.	0.957
VDAG_01132	VDAG_04191	G2WTK9	G2X2Z7	Pre-mRNA-processing factor 17.	Pre-mRNA-splicing factor brr2.	0.994