STRINGSTRING
VDAG_01351 VDAG_01351 VDAG_00613 VDAG_00613 VDAG_00073 VDAG_00073 VDAG_00289 VDAG_00289 VDAG_01078 VDAG_01078 VDAG_01354 VDAG_01354 VDAG_02322 VDAG_02322 VDAG_01670 VDAG_01670 VDAG_01848 VDAG_01848 VDAG_02719 VDAG_02719 VDAG_03152 VDAG_03152 VDAG_03173 VDAG_03173 VDAG_03949 VDAG_03949 VDAG_04655 VDAG_04655 VDAG_05489 VDAG_05489 VDAG_06378 VDAG_06378 VDAG_06655 VDAG_06655 VDAG_07532 VDAG_07532 VDAG_07628 VDAG_07628 VDAG_08432 VDAG_08432 VDAG_08472 VDAG_08472 VDAG_08473 VDAG_08473 VDAG_08700 VDAG_08700 VDAG_08811 VDAG_08811 VDAG_08833 VDAG_08833 VDAG_09021 VDAG_09021 VDAG_08864 VDAG_08864 VDAG_09437 VDAG_09437 VDAG_09457 VDAG_09457 VDAG_09472 VDAG_09472 VDAG_09482 VDAG_09482 VDAG_09778 VDAG_09778 VDAG_09691 VDAG_09691 VDAG_09692 VDAG_09692
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_01351Nucleoporin GLE1. (548 aa)
VDAG_00613THO complex subunit 2. (2374 aa)
VDAG_00073E3 ubiquitin-protein ligase. (806 aa)
VDAG_00289Protein kinase domain-containing protein ppk3. (770 aa)
VDAG_01078COP9 signalosome complex subunit 12. (473 aa)
VDAG_01354Uncharacterized protein. (128 aa)
VDAG_02322Importin subunit beta-3. (1096 aa)
VDAG_01670Transcription factor IWS1. (426 aa)
VDAG_01848Poly(A)+ RNA export protein. (358 aa)
VDAG_02719Prion formation protein. (1112 aa)
VDAG_03152mRNA export factor mex67. (649 aa)
VDAG_03173Uncharacterized protein. (213 aa)
VDAG_03949Uncharacterized protein. (107 aa)
VDAG_04655SAP domain-containing protein. (279 aa)
VDAG_05489C3HC zinc finger domain-containing protein. (521 aa)
VDAG_0637840S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (262 aa)
VDAG_06655THO complex subunit 1. (858 aa)
VDAG_0753240S ribosomal protein S5-B; Belongs to the universal ribosomal protein uS7 family. (212 aa)
VDAG_07628RNA-binding post-transcriptional regulator cip2. (601 aa)
VDAG_08432Cap binding protein. (795 aa)
VDAG_08472Nucear export factor. (635 aa)
VDAG_08473Uncharacterized protein. (429 aa)
VDAG_08700Uncharacterized protein. (357 aa)
VDAG_08811RPOL4c domain-containing protein. (160 aa)
VDAG_08833THO complex subunit 3. (339 aa)
VDAG_09021COP9 signalosome complex subunit 12. (471 aa)
VDAG_08864RRM domain-containing protein. (256 aa)
VDAG_09437RNP domain-containing protein. (458 aa)
VDAG_09457MSN5 protein. (1272 aa)
VDAG_09472U3 small nucleolar RNA-associated protein 22. (1127 aa)
VDAG_09482Smad nuclear-interacting protein. (318 aa)
VDAG_09778Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (1020 aa)
VDAG_09691Uncharacterized protein. (786 aa)
VDAG_09692Ran-specific GTPase-activating protein. (257 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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