STRINGSTRING
VDAG_05766 VDAG_05766 VDAG_05482 VDAG_05482 VDAG_04465 VDAG_04465 VDAG_03070 VDAG_03070 VDAG_03063 VDAG_03063 VDAG_08798 VDAG_08798 VDAG_08699 VDAG_08699 VDAG_06621 VDAG_06621 VDAG_01785 VDAG_01785 VDAG_01899 VDAG_01899 VDAG_02725 VDAG_02725 VDAG_00462 VDAG_00462 VDAG_00844 VDAG_00844 VDAG_00879 VDAG_00879 VDAG_01001 VDAG_01001 VDAG_02139 VDAG_02139 VDAG_01966 VDAG_01966 VDAG_09053 VDAG_09053 VDAG_09052 VDAG_09052
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_05766Cleavage and polyadenylation specificity factor subunit 5. (268 aa)
VDAG_05482Ubiquitin fusion degradation protein. (1809 aa)
VDAG_04465C2H2-type domain-containing protein. (891 aa)
VDAG_03070Uncharacterized protein. (448 aa)
VDAG_03063U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (589 aa)
VDAG_08798YTH domain-containing protein. (448 aa)
VDAG_08699CCCH zinc finger protein. (449 aa)
VDAG_06621Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (604 aa)
VDAG_01785Helicase SEN1. (1968 aa)
VDAG_01899C3H1-type domain-containing protein. (960 aa)
VDAG_02725RRM domain-containing protein. (309 aa)
VDAG_00462CCCH zinc finger and RRM domain-containing protein. (664 aa)
VDAG_00844HRDC domain-containing protein. (804 aa)
VDAG_00879RMI1_N domain-containing protein. (250 aa)
VDAG_01001Multiple RNA-binding domain-containing protein. (866 aa)
VDAG_02139Kinesin-II 95 kDa subunit; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (707 aa)
VDAG_01966UmuC domain-containing protein. (570 aa)
VDAG_09053Uncharacterized protein. (239 aa)
VDAG_09052Uncharacterized protein. (187 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.