STRINGSTRING
VDAG_02873 VDAG_02873 VDAG_01702 VDAG_01702 VDAG_02257 VDAG_02257 VDAG_03662 VDAG_03662 VDAG_04788 VDAG_04788 VDAG_06941 VDAG_06941 VDAG_07429 VDAG_07429 VDAG_07560 VDAG_07560 VDAG_08496 VDAG_08496 VDAG_10050 VDAG_10050 VDAG_10512 VDAG_10512 VDAG_02228 VDAG_02228 VDAG_00591 VDAG_00591 VDAG_03037 VDAG_03037 VDAG_03468 VDAG_03468
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_02873Uncharacterized protein. (348 aa)
VDAG_01702Dihydrodipicolinate synthetase family protein; Belongs to the DapA family. (330 aa)
VDAG_02257Xylulose-5-phosphate phosphoketolase. (721 aa)
VDAG_03662Xylulose-5-phosphate phosphoketolase. (806 aa)
VDAG_04788Dihydrodipicolinate synthase; Belongs to the DapA family. (324 aa)
VDAG_06941Sphingosine-1-phosphate lyase. (566 aa)
VDAG_07429Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (199 aa)
VDAG_07560Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. (273 aa)
VDAG_08496Dihydrodipicolinate synthase; Belongs to the DapA family. (325 aa)
VDAG_10050Dihydrodipicolinate synthase. (377 aa)
VDAG_10512Dihydrodipicolinate synthase; Belongs to the DapA family. (331 aa)
VDAG_02228Dihydrodipicolinate synthase; Belongs to the DapA family. (310 aa)
VDAG_00591Folic acid synthesis protein. (572 aa)
VDAG_03037Threonine aldolase. (389 aa)
VDAG_034683-hydroxyisobutyrate dehydrogenase. (1134 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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