STRINGSTRING
VDAG_09437 VDAG_09437 VDAG_00073 VDAG_00073 VDAG_01078 VDAG_01078 VDAG_01351 VDAG_01351 VDAG_01670 VDAG_01670 VDAG_01848 VDAG_01848 VDAG_02719 VDAG_02719 VDAG_03152 VDAG_03152 VDAG_03949 VDAG_03949 VDAG_04655 VDAG_04655 VDAG_07628 VDAG_07628 VDAG_09021 VDAG_09021
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_09437RNP domain-containing protein. (458 aa)
VDAG_00073E3 ubiquitin-protein ligase. (806 aa)
VDAG_01078COP9 signalosome complex subunit 12. (473 aa)
VDAG_01351Nucleoporin GLE1. (548 aa)
VDAG_01670Transcription factor IWS1. (426 aa)
VDAG_01848Poly(A)+ RNA export protein. (358 aa)
VDAG_02719Prion formation protein. (1112 aa)
VDAG_03152mRNA export factor mex67. (649 aa)
VDAG_03949Uncharacterized protein. (107 aa)
VDAG_04655SAP domain-containing protein. (279 aa)
VDAG_07628RNA-binding post-transcriptional regulator cip2. (601 aa)
VDAG_09021COP9 signalosome complex subunit 12. (471 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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