STRINGSTRING
VDAG_08161 VDAG_08161 VDAG_09949 VDAG_09949 VDAG_09471 VDAG_09471 VDAG_08795 VDAG_08795 VDAG_08541 VDAG_08541 VDAG_07456 VDAG_07456 VDAG_05897 VDAG_05897 VDAG_05875 VDAG_05875 VDAG_05737 VDAG_05737 VDAG_05438 VDAG_05438 VDAG_04456 VDAG_04456 VDAG_03000 VDAG_03000 VDAG_02729 VDAG_02729 VDAG_01751 VDAG_01751 VDAG_01219 VDAG_01219 VDAG_00742 VDAG_00742
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_08161Uncharacterized protein. (457 aa)
VDAG_09949CCCH zinc finger domain-containing protein. (599 aa)
VDAG_09471Nucleoporin Pom152. (1270 aa)
VDAG_08795Uncharacterized protein. (1200 aa)
VDAG_08541Uncharacterized protein. (1407 aa)
VDAG_07456Nucleoporin nup189. (1956 aa)
VDAG_05897Uncharacterized protein. (1665 aa)
VDAG_05875Uncharacterized protein. (888 aa)
VDAG_05737Nup188_C domain-containing protein. (1795 aa)
VDAG_05438TPR_MLP1_2 domain-containing protein. (2093 aa)
VDAG_04456Nuclear pore glycoprotein p62. (721 aa)
VDAG_03000Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (901 aa)
VDAG_02729Nucleoporin nup44. (358 aa)
VDAG_01751Uncharacterized protein. (997 aa)
VDAG_01219Nucleoporin NIC96. (1177 aa)
VDAG_00742Nucleoporin Nup157/170. (1396 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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