STRINGSTRING
VDAG_08457 VDAG_08457 VDAG_00525 VDAG_00525 VDAG_00737 VDAG_00737 VDAG_00180 VDAG_00180 VDAG_00181 VDAG_00181 VDAG_00277 VDAG_00277 VDAG_01625 VDAG_01625 VDAG_00887 VDAG_00887 VDAG_00888 VDAG_00888 VDAG_01001 VDAG_01001 VDAG_01034 VDAG_01034 VDAG_01035 VDAG_01035 VDAG_01108 VDAG_01108 VDAG_01508 VDAG_01508 VDAG_02032 VDAG_02032 VDAG_02440 VDAG_02440 VDAG_02494 VDAG_02494 VDAG_02495 VDAG_02495 VDAG_02496 VDAG_02496 VDAG_02543 VDAG_02543 VDAG_03259 VDAG_03259 VDAG_03305 VDAG_03305 VDAG_03460 VDAG_03460 VDAG_03542 VDAG_03542 VDAG_03062 VDAG_03062 VDAG_04294 VDAG_04294 VDAG_04560 VDAG_04560 VDAG_05756 VDAG_05756 VDAG_05854 VDAG_05854 VDAG_05894 VDAG_05894 VDAG_05940 VDAG_05940 VDAG_06306 VDAG_06306 VDAG_06312 VDAG_06312 VDAG_06273 VDAG_06273 VDAG_07059 VDAG_07059 VDAG_07090 VDAG_07090 VDAG_07532 VDAG_07532 VDAG_08628 VDAG_08628 VDAG_08793 VDAG_08793 VDAG_09422 VDAG_09422 VDAG_09423 VDAG_09423 VDAG_09722 VDAG_09722 VDAG_09603 VDAG_09603 VDAG_10073 VDAG_10073 VDAG_10155 VDAG_10155 VDAG_10199 VDAG_10199 VDAG_10348 VDAG_10348 VDAG_10310 VDAG_10310 VDAG_10400 VDAG_10400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_08457Uncharacterized protein. (897 aa)
VDAG_0052550S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (152 aa)
VDAG_00737S4 RNA-binding domain-containing protein. (515 aa)
VDAG_00180U3 small nucleolar ribonucleoprotein IMP3. (183 aa)
VDAG_00181Uncharacterized protein. (207 aa)
VDAG_00277U3 small nucleolar ribonucleoprotein IMP4. (293 aa)
VDAG_01625Ribosomal_S7 domain-containing protein. (314 aa)
VDAG_00887Ribosome biogenesis protein BRX1. (315 aa)
VDAG_00888F-box domain-containing protein. (426 aa)
VDAG_01001Multiple RNA-binding domain-containing protein. (866 aa)
VDAG_0103440S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (160 aa)
VDAG_01035Uncharacterized protein. (303 aa)
VDAG_01108Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (609 aa)
VDAG_0150860S ribosomal protein L5. (299 aa)
VDAG_02032Uncharacterized protein. (211 aa)
VDAG_0244040S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (191 aa)
VDAG_02494Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
VDAG_02495Uncharacterized protein. (280 aa)
VDAG_02496Uncharacterized protein. (404 aa)
VDAG_0254340S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (262 aa)
VDAG_03259rRNA-processing protein UTP23. (807 aa)
VDAG_03305Ribosome biogenesis protein RPF2. (317 aa)
VDAG_03460Mitochondrial ribosomal protein S18. (248 aa)
VDAG_03542Ribosome biogenesis protein SSF1. (462 aa)
VDAG_0306240S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
VDAG_0429460S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
VDAG_0456060S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
VDAG_0575640S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (156 aa)
VDAG_05854RNA processing factor 1. (416 aa)
VDAG_05894Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (247 aa)
VDAG_0594060S ribosomal protein L2. (254 aa)
VDAG_0630660S ribosomal protein L23a. (157 aa)
VDAG_06312Uncharacterized protein. (312 aa)
VDAG_0627360S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (139 aa)
VDAG_0705954S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (251 aa)
VDAG_07090Uncharacterized protein. (319 aa)
VDAG_0753240S ribosomal protein S5-B; Belongs to the universal ribosomal protein uS7 family. (212 aa)
VDAG_08628Meiotic recombination protein DMC1. (312 aa)
VDAG_0879360S ribosomal protein L9. (193 aa)
VDAG_09422Nucleolar essential protein. (254 aa)
VDAG_09423Uncharacterized protein. (153 aa)
VDAG_09722Mitochondrial 54S ribosomal protein L38; Belongs to the universal ribosomal protein uL14 family. (128 aa)
VDAG_0960337S ribosomal protein Mrp17. (156 aa)
VDAG_1007354S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. (249 aa)
VDAG_10155Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (427 aa)
VDAG_10199Uncharacterized protein. (494 aa)
VDAG_1034860S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
VDAG_1031040S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
VDAG_10400rRNA biogenesis protein RRP5. (1790 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.