STRINGSTRING
VDAG_03959 VDAG_03959 VDAG_05850 VDAG_05850 VDAG_07694 VDAG_07694 VDAG_09957 VDAG_09957 VDAG_10396 VDAG_10396 VDAG_01863 VDAG_01863 VDAG_04476 VDAG_04476
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_03959CNH domain-containing protein. (1066 aa)
VDAG_05850Vacuolar membrane protein pep3. (923 aa)
VDAG_07694Vacuolar membrane protein. (785 aa)
VDAG_09957Vacuolar protein sorting 41. (1350 aa)
VDAG_10396Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (826 aa)
VDAG_01863Uncharacterized protein. (2415 aa)
VDAG_04476Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. (654 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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