52 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_02678	Uncharacterized protein. (455 aa)
	VDAG_01973	Uncharacterized protein. (1217 aa)
	VDAG_01965	DUF726 domain-containing protein. (755 aa)
	VDAG_01219	Nucleoporin NIC96. (1177 aa)
	VDAG_01334	Uncharacterized protein. (135 aa)
	VDAG_01351	Nucleoporin GLE1. (548 aa)
	VDAG_01435	Uncharacterized protein. (417 aa)
	VDAG_01671	Brr6_like_C_C domain-containing protein. (478 aa)
	VDAG_01964	Uncharacterized protein. (196 aa)
	VDAG_01848	Poly(A)+ RNA export protein. (358 aa)
	VDAG_01827	Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (461 aa)
	VDAG_01817	MFS domain-containing protein. (258 aa)
	VDAG_07908	HTH APSES-type domain-containing protein. (438 aa)
	VDAG_07834	tRNA ligase. (819 aa)
	ALG14	UDP-N-acetylglucosamine transferase subunit ALG14; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway. Anchors the catalytic subunit ALG13 to the ER. (283 aa)
	VDAG_07749	Ima1_N domain-containing protein. (680 aa)
	VDAG_07497	Nuclear envelope protein. (638 aa)
	VDAG_07203	BAG domain-containing protein. (383 aa)
	VDAG_07456	Nucleoporin nup189. (1956 aa)
	VDAG_00561	Uncharacterized protein. (461 aa)
	VDAG_00562	Uncharacterized protein. (401 aa)
	VDAG_06361	Cell division control protein. (193 aa)
	VDAG_05875	Uncharacterized protein. (888 aa)
	VDAG_05737	Nup188_C domain-containing protein. (1795 aa)
	VDAG_05516	78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family. (666 aa)
	VDAG_00582	N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (839 aa)
	VDAG_00661	GFA domain-containing protein. (425 aa)
	VDAG_00742	Nucleoporin Nup157/170. (1396 aa)
	VDAG_00080	Vacuolar transporter chaperone 1. (133 aa)
	VDAG_00146	ATP-dependent RNA helicase DBP5. (485 aa)
	VDAG_00205	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1112 aa)
	VDAG_00380	RanBD1 domain-containing protein. (491 aa)
	VDAG_00412	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family. (544 aa)
	VDAG_00884	Pex14_N domain-containing protein. (377 aa)
	VDAG_01091	Transmembrane and coiled-coil domain-containing protein. (719 aa)
	VDAG_07953	Uncharacterized protein. (286 aa)
	VDAG_07995	Uncharacterized protein. (1057 aa)
	VDAG_08510	Uncharacterized protein. (346 aa)
	VDAG_08512	Uncharacterized protein. (887 aa)
	VDAG_08541	Uncharacterized protein. (1407 aa)
	VDAG_08795	Uncharacterized protein. (1200 aa)
	VDAG_08872	DUF636 domain-containing protein. (137 aa)
	VDAG_09453	Phospholipid:diacylglycerol acyltransferase. (645 aa)
	VDAG_09471	Nucleoporin Pom152. (1270 aa)
	VDAG_09962	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (454 aa)
	VDAG_10063	Uncharacterized protein. (453 aa)
	VDAG_04185	NPL4 protein. (673 aa)
	VDAG_04085	Sphingolipid long chain base-responsive protein PIL1. (381 aa)
	VDAG_04257	Uncharacterized protein. (1563 aa)
	VDAG_04249	Uncharacterized protein. (693 aa)
	VDAG_03000	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (901 aa)
	VDAG_02729	Nucleoporin nup44. (358 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_00146	VDAG_01351	G2WRG3	G2WU78	ATP-dependent RNA helicase DBP5.	Nucleoporin GLE1.	0.975
VDAG_00146	VDAG_01848	G2WRG3	G2WW62	ATP-dependent RNA helicase DBP5.	Poly(A)+ RNA export protein.	0.613
VDAG_00146	VDAG_04257	G2WRG3	G2X1T3	ATP-dependent RNA helicase DBP5.	Uncharacterized protein.	0.993
VDAG_00146	VDAG_07456	G2WRG3	G2XB26	ATP-dependent RNA helicase DBP5.	Nucleoporin nup189.	0.421
VDAG_00205	VDAG_03000	G2WRM2	G2WZX7	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.414
VDAG_00205	VDAG_05875	G2WRM2	G2X6U3	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.426
VDAG_00205	VDAG_07456	G2WRM2	G2XB26	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin nup189.	0.825
VDAG_00205	VDAG_08795	G2WRM2	G2XF63	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.854
VDAG_00380	VDAG_00412	G2WS47	G2WS79	RanBD1 domain-containing protein.	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	0.800
VDAG_00380	VDAG_00742	G2WS47	G2WQV0	RanBD1 domain-containing protein.	Nucleoporin Nup157/170.	0.862
VDAG_00380	VDAG_01219	G2WS47	G2WTU6	RanBD1 domain-containing protein.	Nucleoporin NIC96.	0.879
VDAG_00380	VDAG_01351	G2WS47	G2WU78	RanBD1 domain-containing protein.	Nucleoporin GLE1.	0.533
VDAG_00380	VDAG_01848	G2WS47	G2WW62	RanBD1 domain-containing protein.	Poly(A)+ RNA export protein.	0.726
VDAG_00380	VDAG_02729	G2WS47	G2WWV0	RanBD1 domain-containing protein.	Nucleoporin nup44.	0.825
VDAG_00380	VDAG_03000	G2WS47	G2WZX7	RanBD1 domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.820
VDAG_00380	VDAG_04257	G2WS47	G2X1T3	RanBD1 domain-containing protein.	Uncharacterized protein.	0.843
VDAG_00380	VDAG_07456	G2WS47	G2XB26	RanBD1 domain-containing protein.	Nucleoporin nup189.	0.560
VDAG_00380	VDAG_08541	G2WS47	G2XEF6	RanBD1 domain-containing protein.	Uncharacterized protein.	0.810
VDAG_00412	VDAG_00380	G2WS79	G2WS47	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	RanBD1 domain-containing protein.	0.800
VDAG_00412	VDAG_00742	G2WS79	G2WQV0	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin Nup157/170.	0.993