STRINGSTRING
VDAG_00400 VDAG_00400 VDAG_08410 VDAG_08410 VDAG_06689 VDAG_06689 VDAG_01520 VDAG_01520 VDAG_00824 VDAG_00824 VDAG_00463 VDAG_00463
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_004005-formyltetrahydrofolate cyclo-ligase. (252 aa)
VDAG_08410Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (670 aa)
VDAG_06689Serine hydroxymethyltransferase. (467 aa)
VDAG_01520C-1-tetrahydrofolate synthase. (921 aa)
VDAG_00824Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (483 aa)
VDAG_00463Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. (609 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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