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VDAG_03063 VDAG_03063 VDAG_01644 VDAG_01644 VDAG_08411 VDAG_08411 VDAG_04652 VDAG_04652 VDAG_04200 VDAG_04200 VDAG_01971 VDAG_01971 VDAG_08466 VDAG_08466 VDAG_08798 VDAG_08798 VDAG_02439 VDAG_02439 VDAG_10305 VDAG_10305 VDAG_03123 VDAG_03123
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_03063U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (589 aa)
VDAG_01644Pre-mRNA-splicing factor slt-11. (381 aa)
VDAG_08411Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (967 aa)
VDAG_04652Branchpoint-bridging protein. (590 aa)
VDAG_04200Splicing factor U2AF 23 kDa subunit. (210 aa)
VDAG_01971Branchpoint-bridging protein. (327 aa)
VDAG_08466Pre-mRNA-splicing factor CWC2. (411 aa)
VDAG_08798YTH domain-containing protein. (448 aa)
VDAG_02439Pre-mRNA-splicing factor SLU7. (468 aa)
VDAG_10305Pre-mRNA-splicing factor spp42. (2874 aa)
VDAG_03123Pre-mRNA-processing factor 39. (576 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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