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VDAG_00058 VDAG_00058 VDAG_00416 VDAG_00416 VDAG_01625 VDAG_01625 VDAG_00887 VDAG_00887 VDAG_00888 VDAG_00888 VDAG_01001 VDAG_01001 VDAG_01473 VDAG_01473 VDAG_01508 VDAG_01508 VDAG_02167 VDAG_02167 VDAG_01733 VDAG_01733 VDAG_02726 VDAG_02726 VDAG_02854 VDAG_02854 VDAG_03149 VDAG_03149 VDAG_03305 VDAG_03305 VDAG_03315 VDAG_03315 VDAG_03460 VDAG_03460 VDAG_03542 VDAG_03542 VDAG_04294 VDAG_04294 VDAG_04364 VDAG_04364 VDAG_04443 VDAG_04443 VDAG_04596 VDAG_04596 VDAG_05757 VDAG_05757 VDAG_05889 VDAG_05889 VDAG_05894 VDAG_05894 VDAG_06306 VDAG_06306 VDAG_06350 VDAG_06350 TIF6 TIF6 VDAG_06486 VDAG_06486 VDAG_06695 VDAG_06695 RPS0 RPS0 VDAG_07096 VDAG_07096 VDAG_07532 VDAG_07532 VDAG_08457 VDAG_08457 VDAG_08470 VDAG_08470 VDAG_08577 VDAG_08577 VDAG_08628 VDAG_08628 VDAG_10155 VDAG_10155 VDAG_10283 VDAG_10283 VDAG_10310 VDAG_10310 VDAG_10400 VDAG_10400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_0005840S ribosomal protein S19. (152 aa)
VDAG_00416Uncharacterized protein. (68 aa)
VDAG_01625Ribosomal_S7 domain-containing protein. (314 aa)
VDAG_00887Ribosome biogenesis protein BRX1. (315 aa)
VDAG_00888F-box domain-containing protein. (426 aa)
VDAG_01001Multiple RNA-binding domain-containing protein. (866 aa)
VDAG_01473Periodic tryptophan protein. (861 aa)
VDAG_0150860S ribosomal protein L5. (299 aa)
VDAG_02167Mitochondrial acidic protein MAM33. (307 aa)
VDAG_0173340S ribosomal protein S27. (82 aa)
VDAG_02726Ribosome biogenesis protein Sqt1. (500 aa)
VDAG_02854WD repeat-containing protein. (515 aa)
VDAG_03149Uncharacterized protein. (401 aa)
VDAG_03305Ribosome biogenesis protein RPF2. (317 aa)
VDAG_0331540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
VDAG_03460Mitochondrial ribosomal protein S18. (248 aa)
VDAG_03542Ribosome biogenesis protein SSF1. (462 aa)
VDAG_0429460S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
VDAG_0436460S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
VDAG_04443Mni1p. (366 aa)
VDAG_0459640S ribosomal protein S28. (68 aa)
VDAG_05757Shwachman-Bodian-Diamond syndrome protein. (305 aa)
VDAG_05889Eukaryotic translation initiation factor 5. (428 aa)
VDAG_05894Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (247 aa)
VDAG_0630660S ribosomal protein L23a. (157 aa)
VDAG_06350Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (4992 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
VDAG_0648660S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
VDAG_06695Mitochondrial large ribosomal subunit protein; Belongs to the universal ribosomal protein uL22 family. (311 aa)
RPS040S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
VDAG_07096Mitochondrial ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (93 aa)
VDAG_0753240S ribosomal protein S5-B; Belongs to the universal ribosomal protein uS7 family. (212 aa)
VDAG_08457Uncharacterized protein. (897 aa)
VDAG_08470Nucleolar GTP-binding protein. (643 aa)
VDAG_0857760S ribosomal protein L10-B. (222 aa)
VDAG_08628Meiotic recombination protein DMC1. (312 aa)
VDAG_10155Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (427 aa)
VDAG_10283Elongation factor 2. (770 aa)
VDAG_1031040S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
VDAG_10400rRNA biogenesis protein RRP5. (1790 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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