STRINGSTRING
VDAG_10043 VDAG_10043 VDAG_10122 VDAG_10122 VDAG_10129 VDAG_10129 VDAG_10136 VDAG_10136 VDAG_10220 VDAG_10220 VDAG_10249 VDAG_10249 VDAG_10320 VDAG_10320 PAN3 PAN3 VDAG_10410 VDAG_10410 VDAG_10416 VDAG_10416 VDAG_10433 VDAG_10433 VDAG_10434 VDAG_10434 VDAG_10523 VDAG_10523 BNA5 BNA5 LSM4 LSM4 VDAG_00630 VDAG_00630 VDAG_00659 VDAG_00659 VDAG_00097 VDAG_00097 VDAG_00176 VDAG_00176 VDAG_00276 VDAG_00276 VDAG_00312 VDAG_00312 VDAG_00315 VDAG_00315 VDAG_00355 VDAG_00355 VDAG_00356 VDAG_00356 VDAG_00371 VDAG_00371 VDAG_00377 VDAG_00377 VDAG_00819 VDAG_00819 VDAG_00844 VDAG_00844 VDAG_00878 VDAG_00878 VDAG_00912 VDAG_00912 VDAG_00927 VDAG_00927 VDAG_00960 VDAG_00960 VDAG_01099 VDAG_01099 BNA4 BNA4 VDAG_01195 VDAG_01195 VDAG_01352 VDAG_01352 VDAG_01353 VDAG_01353 VDAG_01364 VDAG_01364 VDAG_01365 VDAG_01365 VDAG_01384 VDAG_01384 VDAG_01435 VDAG_01435 VDAG_01439 VDAG_01439 VDAG_02195 VDAG_02195 VDAG_02213 VDAG_02213 VDAG_02214 VDAG_02214 VDAG_01641 VDAG_01641 VDAG_01665 VDAG_01665 VDAG_01741 VDAG_01741 VDAG_01899 VDAG_01899 VDAG_02009 VDAG_02009 VDAG_02693 VDAG_02693 VDAG_02740 VDAG_02740 VDAG_02822 VDAG_02822 VDAG_02462 VDAG_02462 VDAG_02477 VDAG_02477 VDAG_02629 VDAG_02629 VDAG_02662 VDAG_02662 VDAG_03106 VDAG_03106 VDAG_03145 VDAG_03145 VDAG_03195 VDAG_03195 VDAG_03457 VDAG_03457 VDAG_03009 VDAG_03009 VDAG_03080 VDAG_03080 VDAG_03898 VDAG_03898 VDAG_03910 VDAG_03910 VDAG_04044 VDAG_04044 VDAG_03573 VDAG_03573 VDAG_04289 VDAG_04289 VDAG_04312 VDAG_04312 VDAG_04392 VDAG_04392 BNA1 BNA1 VDAG_04128 VDAG_04128 VDAG_04163 VDAG_04163 VDAG_04165 VDAG_04165 VDAG_04185 VDAG_04185 VDAG_04852 VDAG_04852 VDAG_04930 VDAG_04930 VDAG_04564 VDAG_04564 VDAG_04571 VDAG_04571 VDAG_04694 VDAG_04694 VDAG_04721 VDAG_04721 VDAG_04746 VDAG_04746 VDAG_05148 VDAG_05148 VDAG_05195 VDAG_05195 VDAG_05198 VDAG_05198 VDAG_05209 VDAG_05209 VDAG_05235 VDAG_05235 VDAG_05447 VDAG_05447 VDAG_05474 VDAG_05474 VDAG_05486 VDAG_05486 VDAG_05517 VDAG_05517 VDAG_05624 VDAG_05624 VDAG_05672 VDAG_05672 VDAG_05689 VDAG_05689 VDAG_05692 VDAG_05692 VDAG_05699 VDAG_05699 VDAG_05803 VDAG_05803 VDAG_05817 VDAG_05817 VDAG_05840 VDAG_05840 VDAG_05874 VDAG_05874 VDAG_05895 VDAG_05895 VDAG_05909 VDAG_05909 VDAG_06312 VDAG_06312 VDAG_06391 VDAG_06391 VDAG_06397 VDAG_06397 VDAG_06446 VDAG_06446 VDAG_06483 VDAG_06483 VDAG_06565 VDAG_06565 VDAG_06182 VDAG_06182 VDAG_06183 VDAG_06183 VDAG_06223 VDAG_06223 VDAG_06234 VDAG_06234 VDAG_06596 VDAG_06596 VDAG_06621 VDAG_06621 VDAG_06637 VDAG_06637 VDAG_06639 VDAG_06639 VDAG_06800 VDAG_06800 VDAG_06801 VDAG_06801 VDAG_06858 VDAG_06858 VDAG_07155 VDAG_07155 VDAG_06924 VDAG_06924 VDAG_06932 VDAG_06932 VDAG_07102 VDAG_07102 VDAG_07308 VDAG_07308 PAN2 PAN2 VDAG_07372 VDAG_07372 VDAG_07445 VDAG_07445 VDAG_07472 VDAG_07472 VDAG_07486 VDAG_07486 VDAG_07514 VDAG_07514 VDAG_07628 VDAG_07628 VDAG_07602 VDAG_07602 AAH1 AAH1 VDAG_07735 VDAG_07735 VDAG_07754 VDAG_07754 VDAG_07909 VDAG_07909 VDAG_08015 VDAG_08015 VDAG_08025 VDAG_08025 VDAG_08076 VDAG_08076 VDAG_08239 VDAG_08239 VDAG_08301 VDAG_08301 VDAG_08331 VDAG_08331 LSM5 LSM5 VDAG_08432 VDAG_08432 VDAG_08545 VDAG_08545 VDAG_08556 VDAG_08556 VDAG_08638 VDAG_08638 VDAG_08699 VDAG_08699 VDAG_08783 VDAG_08783 VDAG_08798 VDAG_08798 VDAG_08811 VDAG_08811 VDAG_09169 VDAG_09169 VDAG_09052 VDAG_09052 VDAG_09053 VDAG_09053 VDAG_08882 VDAG_08882 VDAG_08884 VDAG_08884 VDAG_08911 VDAG_08911 VDAG_09411 VDAG_09411 VDAG_09437 VDAG_09437 VDAG_09632 VDAG_09632 VDAG_09658 VDAG_09658 FEN1 FEN1 VDAG_09905 VDAG_09905 VDAG_09966 VDAG_09966 VDAG_10107 VDAG_10107 VDAG_10119 VDAG_10119
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_10043Uncharacterized protein. (438 aa)
VDAG_10122ATP-dependent RNA helicase SUV3. (748 aa)
VDAG_10129Caffeine-induced death protein. (1075 aa)
VDAG_10136Uncharacterized protein. (415 aa)
VDAG_10220Hemoglobin; Belongs to the globin family. (425 aa)
VDAG_10249Bis(5'-adenosyl)-triphosphatase. (199 aa)
VDAG_10320Sm domain-containing protein. (140 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent 5'-3' exo [...] (631 aa)
VDAG_10410Inosine/uridine-preferring nucleoside hydrolase. (354 aa)
VDAG_10416Uncharacterized protein. (725 aa)
VDAG_10433Golgi apyrase; Belongs to the GDA1/CD39 NTPase family. (682 aa)
VDAG_10434Uncharacterized protein. (205 aa)
VDAG_10523Indoleamine 2,3-dioxygenase family protein. (436 aa)
BNA5Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family. (488 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (130 aa)
VDAG_00630Guanine deaminase. (489 aa)
VDAG_00659Zn(2)-C6 fungal-type domain-containing protein. (594 aa)
VDAG_00097CCR4-NOT transcription complex subunit 3. (650 aa)
VDAG_00176A_deaminase domain-containing protein. (583 aa)
VDAG_00276ATP-dependent helicase NAM7. (1099 aa)
VDAG_00312Uncharacterized protein. (936 aa)
VDAG_00315Exosome complex exonuclease RRP40. (245 aa)
VDAG_00355SSM1 protein. (247 aa)
VDAG_00356Uncharacterized protein. (873 aa)
VDAG_00371Thermotolerance protein. (1315 aa)
VDAG_00377Nonsense-mediated mRNA decay protein. (1070 aa)
VDAG_00819Uncharacterized protein. (834 aa)
VDAG_00844HRDC domain-containing protein. (804 aa)
VDAG_00878Uncharacterized protein. (1415 aa)
VDAG_00912Exosome complex exonuclease RRP42. (367 aa)
VDAG_00927Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family. (836 aa)
VDAG_00960Uncharacterized protein. (115 aa)
VDAG_01099Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. (255 aa)
BNA4Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid. (516 aa)
VDAG_01195Uncharacterized protein. (287 aa)
VDAG_01352Uncharacterized protein. (454 aa)
VDAG_01353SSD1 protein. (362 aa)
VDAG_013643'-5' exoribonuclease CSL4. (306 aa)
VDAG_01365Sec2p domain-containing protein. (324 aa)
VDAG_013845'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1404 aa)
VDAG_01435Uncharacterized protein. (417 aa)
VDAG_01439Guanosine-diphosphatase; Belongs to the GDA1/CD39 NTPase family. (547 aa)
VDAG_02195Allantoinase. (510 aa)
VDAG_02213Uncharacterized protein. (221 aa)
VDAG_02214Uncharacterized protein. (632 aa)
VDAG_01641Antiviral helicase SKI2. (1283 aa)
VDAG_01665HD domain-containing protein. (224 aa)
VDAG_01741EST1_DNA_bind domain-containing protein. (777 aa)
VDAG_01899C3H1-type domain-containing protein. (960 aa)
VDAG_02009Lariat debranching enzyme. (577 aa)
VDAG_02693Ser/Thr protein phosphatase family. (610 aa)
VDAG_02740Uncharacterized protein. (185 aa)
VDAG_02822Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family. (299 aa)
VDAG_02462Nuclease S1. (346 aa)
VDAG_02477Exosome-associated family protein. (181 aa)
VDAG_02629Nuclease. (695 aa)
VDAG_02662Exosome complex exonuclease RRP43. (336 aa)
VDAG_03106Inosine-uridine preferring nucleoside hydrolase. (437 aa)
VDAG_03145Mago-bind domain-containing protein. (211 aa)
VDAG_03195Crossover junction endonuclease MUS81. (567 aa)
VDAG_03457Uncharacterized protein. (274 aa)
VDAG_03009RNase_PH domain-containing protein. (249 aa)
VDAG_03080MGS207 protein. (416 aa)
VDAG_03898AB hydrolase-1 domain-containing protein. (183 aa)
VDAG_03910Allantoicase. (353 aa)
VDAG_04044Deoxyribonuclease tatD. (381 aa)
VDAG_035733',5'-cyclic-nucleotide phosphodiesterase. (518 aa)
VDAG_04289Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (170 aa)
VDAG_04312Deoxyuridine 5'-triphosphate nucleotidohydrolase. (193 aa)
VDAG_04392DNA-directed RNA polymerase II subunit RPB7. (171 aa)
BNA13-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate. (184 aa)
VDAG_04128Methylmalonate-semialdehyde dehydrogenase. (582 aa)
VDAG_04163Alpha-ketoglutarate dependent xanthine dioxygenase. (375 aa)
VDAG_04165Uridine nucleosidase. (392 aa)
VDAG_04185NPL4 protein. (673 aa)
VDAG_04852Uncharacterized protein. (580 aa)
VDAG_04930NTP_transf_9 domain-containing protein. (165 aa)
VDAG_04564Uncharacterized protein. (287 aa)
VDAG_045714-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
VDAG_04694Glucose-repressible alcohol dehydrogenase transcriptional effector. (703 aa)
VDAG_047215'-nucleotidase; Belongs to the 5'-nucleotidase family. (561 aa)
VDAG_04746Uncharacterized protein. (283 aa)
VDAG_05148MADS-box domain-containing protein. (259 aa)
VDAG_05195Uncharacterized protein. (138 aa)
VDAG_05198Uncharacterized protein. (169 aa)
VDAG_05209MADS-box domain-containing protein. (259 aa)
VDAG_05235MADS-box domain-containing protein. (264 aa)
VDAG_05447Smr domain-containing protein. (531 aa)
VDAG_05474General negative regulator of transcription subunit 4. (1611 aa)
VDAG_05486Atrial gland-specific antigen. (646 aa)
VDAG_05517Elongation factor 1-alpha. (798 aa)
VDAG_05624Indoleamine 2,3-dioxygenase family protein. (517 aa)
VDAG_05672Fungal_trans domain-containing protein. (579 aa)
VDAG_05689ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (581 aa)
VDAG_05692Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family. (293 aa)
VDAG_05699Uncharacterized protein. (41 aa)
VDAG_05803Exosome complex exonuclease RRP45. (305 aa)
VDAG_05817Uncharacterized protein. (154 aa)
VDAG_05840Pumilio domain-containing protein. (1160 aa)
VDAG_05874Nuclear cap-binding protein subunit 2. (186 aa)
VDAG_05895Cullin-4A; Belongs to the cullin family. (794 aa)
VDAG_05909Pumilio domain-containing protein. (825 aa)
VDAG_06312Uncharacterized protein. (312 aa)
VDAG_06391CCR4-NOT transcription complex subunit 7. (503 aa)
VDAG_063974-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (502 aa)
VDAG_06446Endonuclease. (351 aa)
VDAG_06483Uncharacterized protein. (236 aa)
VDAG_06565Uncharacterized protein. (364 aa)
VDAG_06182Guanine deaminase. (463 aa)
VDAG_06183Hemoglobin; Belongs to the globin family. (424 aa)
VDAG_06223Exosome complex exonuclease RRP41. (275 aa)
VDAG_06234Nudix hydrolase; Belongs to the Nudix hydrolase family. (161 aa)
VDAG_06596RRM domain-containing protein. (650 aa)
VDAG_06621Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (604 aa)
VDAG_06637Uncharacterized protein. (286 aa)
VDAG_06639mRNA-decapping enzyme. (816 aa)
VDAG_06800Uncharacterized protein. (177 aa)
VDAG_06801Nudix/MutT family protein. (158 aa)
VDAG_06858Uncharacterized protein. (272 aa)
VDAG_0715526S protease regulatory subunit 8; Belongs to the AAA ATPase family. (389 aa)
VDAG_06924Urea amidolyase. (1816 aa)
VDAG_06932Nitrilase and fragile histidine triad fusion protein NitFhit. (291 aa)
VDAG_07102Uncharacterized protein. (1616 aa)
VDAG_07308Poly(A) RNA polymerase cid14. (726 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1077 aa)
VDAG_07372Endonuclease/exonuclease/phosphatase family protein. (324 aa)
VDAG_07445Eukaryotic peptide chain release factor GTP-binding subunit. (706 aa)
VDAG_07472Uncharacterized protein. (2176 aa)
VDAG_07486Meiotic recombination protein rec14. (336 aa)
VDAG_07514Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (351 aa)
VDAG_07628RNA-binding post-transcriptional regulator cip2. (601 aa)
VDAG_07602ERCC4 domain-containing protein. (777 aa)
AAH1Adenine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenine deaminase type 2 subfamily. (359 aa)
VDAG_07735Xanthine dehydrogenase. (1291 aa)
VDAG_07754ATP-dependent RNA helicase DOB1. (1106 aa)
VDAG_079093-hydroxyisobutyrate dehydrogenase. (336 aa)
VDAG_08015DCS2 protein. (294 aa)
VDAG_08025Adenosine deaminase. (357 aa)
VDAG_08076A_deaminase domain-containing protein. (559 aa)
VDAG_08239Flagellar associated protein; Belongs to the 5'-nucleotidase family. (666 aa)
VDAG_08301Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (187 aa)
VDAG_08331AB hydrolase-1 domain-containing protein. (257 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (80 aa)
VDAG_08432Cap binding protein. (795 aa)
VDAG_08545Exosome complex exonuclease RRP4. (354 aa)
VDAG_08556Uncharacterized protein. (544 aa)
VDAG_08638Uncharacterized protein. (529 aa)
VDAG_08699CCCH zinc finger protein. (449 aa)
VDAG_08783Mitotic control protein dis3; Belongs to the RNR ribonuclease family. (984 aa)
VDAG_08798YTH domain-containing protein. (448 aa)
VDAG_08811RPOL4c domain-containing protein. (160 aa)
VDAG_09169Uncharacterized protein. (289 aa)
VDAG_09052Uncharacterized protein. (187 aa)
VDAG_09053Uncharacterized protein. (239 aa)
VDAG_08882Meiotic coiled-coil protein. (763 aa)
VDAG_08884Ribonuclease. (426 aa)
VDAG_08911Ubiquitin fusion degradation protein. (374 aa)
VDAG_09411Amidohydrolase family protein. (307 aa)
VDAG_09437RNP domain-containing protein. (458 aa)
VDAG_09632Adenosine deaminase. (361 aa)
VDAG_09658Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (398 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (394 aa)
VDAG_09905PAT1 domain-containing protein. (846 aa)
VDAG_09966DNA polymerase subunit delta-2. (503 aa)
VDAG_10107Cell differentiation protein rcd1. (357 aa)
VDAG_10119Aliphatic nitrilase. (323 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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