10 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_06470	DUF2040 domain-containing protein. (440 aa)
	VDAG_01707	Rna-binding protein. (800 aa)
	VDAG_01885	Uncharacterized protein. (220 aa)
	VDAG_01886	Uncharacterized protein. (241 aa)
	VDAG_01971	Branchpoint-bridging protein. (327 aa)
	VDAG_01972	Uncharacterized protein. (457 aa)
	VDAG_03445	Serine/threonine-protein kinase prp4. (838 aa)
	VDAG_03004	PWI domain-containing protein. (397 aa)
	VDAG_04577	RNA-binding protein. (344 aa)
	VDAG_04652	Branchpoint-bridging protein. (590 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_01707	VDAG_03004	G2WVS1	G2WZY1	Rna-binding protein.	PWI domain-containing protein.	0.636
VDAG_01707	VDAG_03445	G2WVS1	G2WZK3	Rna-binding protein.	Serine/threonine-protein kinase prp4.	0.665
VDAG_01707	VDAG_04577	G2WVS1	G2X3J0	Rna-binding protein.	RNA-binding protein.	0.688
VDAG_01885	VDAG_01886	G2WW99	G2WWA0	Uncharacterized protein.	Uncharacterized protein.	0.899
VDAG_01885	VDAG_06470	G2WW99	G2X7L2	Uncharacterized protein.	DUF2040 domain-containing protein.	0.637
VDAG_01886	VDAG_01885	G2WWA0	G2WW99	Uncharacterized protein.	Uncharacterized protein.	0.899
VDAG_01886	VDAG_06470	G2WWA0	G2X7L2	Uncharacterized protein.	DUF2040 domain-containing protein.	0.637
VDAG_03004	VDAG_01707	G2WZY1	G2WVS1	PWI domain-containing protein.	Rna-binding protein.	0.636
VDAG_03004	VDAG_03445	G2WZY1	G2WZK3	PWI domain-containing protein.	Serine/threonine-protein kinase prp4.	0.693
VDAG_03004	VDAG_04577	G2WZY1	G2X3J0	PWI domain-containing protein.	RNA-binding protein.	0.498
VDAG_03004	VDAG_06470	G2WZY1	G2X7L2	PWI domain-containing protein.	DUF2040 domain-containing protein.	0.805
VDAG_03445	VDAG_01707	G2WZK3	G2WVS1	Serine/threonine-protein kinase prp4.	Rna-binding protein.	0.665
VDAG_03445	VDAG_03004	G2WZK3	G2WZY1	Serine/threonine-protein kinase prp4.	PWI domain-containing protein.	0.693
VDAG_03445	VDAG_04577	G2WZK3	G2X3J0	Serine/threonine-protein kinase prp4.	RNA-binding protein.	0.545
VDAG_04577	VDAG_01707	G2X3J0	G2WVS1	RNA-binding protein.	Rna-binding protein.	0.688
VDAG_04577	VDAG_03004	G2X3J0	G2WZY1	RNA-binding protein.	PWI domain-containing protein.	0.498
VDAG_04577	VDAG_03445	G2X3J0	G2WZK3	RNA-binding protein.	Serine/threonine-protein kinase prp4.	0.545
VDAG_06470	VDAG_01885	G2X7L2	G2WW99	DUF2040 domain-containing protein.	Uncharacterized protein.	0.637
VDAG_06470	VDAG_01886	G2X7L2	G2WWA0	DUF2040 domain-containing protein.	Uncharacterized protein.	0.637
VDAG_06470	VDAG_03004	G2X7L2	G2WZY1	DUF2040 domain-containing protein.	PWI domain-containing protein.	0.805