STRINGSTRING
VDAG_06551 VDAG_06551 VDAG_08631 VDAG_08631 VDAG_09452 VDAG_09452 VDAG_10237 VDAG_10237 VDAG_06453 VDAG_06453 VDAG_05533 VDAG_05533 VDAG_05515 VDAG_05515 VDAG_04747 VDAG_04747 VDAG_01787 VDAG_01787
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_06551Coronin; Belongs to the WD repeat coronin family. (616 aa)
VDAG_08631BAR domain-containing protein. (462 aa)
VDAG_09452LDB17 protein. (493 aa)
VDAG_10237SH3 domain-containing protein. (1242 aa)
VDAG_06453MesA. (843 aa)
VDAG_05533SH3 domain-containing protein. (413 aa)
VDAG_05515VHS domain-containing protein. (434 aa)
VDAG_04747BAR domain-containing protein. (261 aa)
VDAG_01787Uncharacterized protein. (608 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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