6 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_08700	Uncharacterized protein. (357 aa)
	VDAG_08864	RRM domain-containing protein. (256 aa)
	VDAG_08833	THO complex subunit 3. (339 aa)
	VDAG_06655	THO complex subunit 1. (858 aa)
	VDAG_03173	Uncharacterized protein. (213 aa)
	VDAG_01780	ATP-dependent RNA helicase SUB2. (513 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_01780	VDAG_03173	G2WVZ4	G2WYT1	ATP-dependent RNA helicase SUB2.	Uncharacterized protein.	0.968
VDAG_01780	VDAG_06655	G2WVZ4	G2X923	ATP-dependent RNA helicase SUB2.	THO complex subunit 1.	0.966
VDAG_01780	VDAG_08700	G2WVZ4	G2XEW8	ATP-dependent RNA helicase SUB2.	Uncharacterized protein.	0.972
VDAG_01780	VDAG_08833	G2WVZ4	G2XFA1	ATP-dependent RNA helicase SUB2.	THO complex subunit 3.	0.937
VDAG_01780	VDAG_08864	G2WVZ4	G2XG77	ATP-dependent RNA helicase SUB2.	RRM domain-containing protein.	0.999
VDAG_03173	VDAG_01780	G2WYT1	G2WVZ4	Uncharacterized protein.	ATP-dependent RNA helicase SUB2.	0.968
VDAG_03173	VDAG_06655	G2WYT1	G2X923	Uncharacterized protein.	THO complex subunit 1.	0.999
VDAG_03173	VDAG_08700	G2WYT1	G2XEW8	Uncharacterized protein.	Uncharacterized protein.	0.999
VDAG_03173	VDAG_08833	G2WYT1	G2XFA1	Uncharacterized protein.	THO complex subunit 3.	0.998
VDAG_03173	VDAG_08864	G2WYT1	G2XG77	Uncharacterized protein.	RRM domain-containing protein.	0.986
VDAG_06655	VDAG_01780	G2X923	G2WVZ4	THO complex subunit 1.	ATP-dependent RNA helicase SUB2.	0.966
VDAG_06655	VDAG_03173	G2X923	G2WYT1	THO complex subunit 1.	Uncharacterized protein.	0.999
VDAG_06655	VDAG_08700	G2X923	G2XEW8	THO complex subunit 1.	Uncharacterized protein.	0.998
VDAG_06655	VDAG_08833	G2X923	G2XFA1	THO complex subunit 1.	THO complex subunit 3.	0.999
VDAG_06655	VDAG_08864	G2X923	G2XG77	THO complex subunit 1.	RRM domain-containing protein.	0.985
VDAG_08700	VDAG_01780	G2XEW8	G2WVZ4	Uncharacterized protein.	ATP-dependent RNA helicase SUB2.	0.972
VDAG_08700	VDAG_03173	G2XEW8	G2WYT1	Uncharacterized protein.	Uncharacterized protein.	0.999
VDAG_08700	VDAG_06655	G2XEW8	G2X923	Uncharacterized protein.	THO complex subunit 1.	0.998
VDAG_08700	VDAG_08833	G2XEW8	G2XFA1	Uncharacterized protein.	THO complex subunit 3.	0.998
VDAG_08700	VDAG_08864	G2XEW8	G2XG77	Uncharacterized protein.	RRM domain-containing protein.	0.815