48 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_07288	Zn(2)-C6 fungal-type domain-containing protein. (714 aa)
	VDAG_07456	Nucleoporin nup189. (1956 aa)
	VDAG_07468	Nuclear transport factor 2. (125 aa)
	VDAG_07497	Nuclear envelope protein. (638 aa)
	VDAG_07767	Dihydroflavonol-4-reductase. (353 aa)
	VDAG_07866	Acetyl-CoA hydrolase. (526 aa)
	VDAG_08099	NADPH-dependent methylglyoxal reductase GRE2. (331 aa)
	VDAG_08113	3-beta hydroxysteroid dehydrogenase/isomerase family protein. (521 aa)
	VDAG_08161	Uncharacterized protein. (457 aa)
	VDAG_08505	Uncharacterized protein. (239 aa)
	VDAG_08541	Uncharacterized protein. (1407 aa)
	VDAG_08795	Uncharacterized protein. (1200 aa)
	VDAG_09471	Nucleoporin Pom152. (1270 aa)
	VDAG_09589	Acetoacetyl-coenzyme A synthetase. (695 aa)
	VDAG_09949	CCCH zinc finger domain-containing protein. (599 aa)
	VDAG_09973	NTF2 domain-containing protein. (227 aa)
	VDAG_10018	2-oxoglutarate dehydrogenase E1. (1047 aa)
	VDAG_10488	ELYS domain-containing protein. (293 aa)
	VDAG_10446	Uncharacterized protein. (476 aa)
	VDAG_00742	Nucleoporin Nup157/170. (1396 aa)
	VDAG_00146	ATP-dependent RNA helicase DBP5. (485 aa)
	VDAG_00205	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (1112 aa)
	VDAG_00289	Protein kinase domain-containing protein ppk3. (770 aa)
	VDAG_00412	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family. (544 aa)
	VDAG_00960	Uncharacterized protein. (115 aa)
	VDAG_01000	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (100 aa)
	VDAG_01219	Nucleoporin NIC96. (1177 aa)
	VDAG_01321	GAS2 domain-containing protein. (1019 aa)
	VDAG_01324	Acetoacetyl-coenzyme A synthetase. (668 aa)
	VDAG_01351	Nucleoporin GLE1. (548 aa)
	VDAG_01751	Uncharacterized protein. (997 aa)
	VDAG_02030	Ketoreductase. (347 aa)
	VDAG_02729	Nucleoporin nup44. (358 aa)
	VDAG_02775	Methylcrotonoyl-CoA carboxylase subunit alpha. (760 aa)
	VDAG_02916	Fungal_trans domain-containing protein. (652 aa)
	VDAG_02406	Uncharacterized protein. (384 aa)
	VDAG_02475	Reductase. (353 aa)
	VDAG_03310	Uncharacterized protein. (1253 aa)
	VDAG_03716	Aldehyde reductase. (300 aa)
	VDAG_04257	Uncharacterized protein. (1563 aa)
	VDAG_04456	Nuclear pore glycoprotein p62. (721 aa)
	VDAG_04687	Zn(2)-C6 fungal-type domain-containing protein. (650 aa)
	VDAG_05438	TPR_MLP1_2 domain-containing protein. (2093 aa)
	VDAG_05737	Nup188_C domain-containing protein. (1795 aa)
	VDAG_05835	Aldehyde reductase. (343 aa)
	VDAG_05875	Uncharacterized protein. (888 aa)
	VDAG_05897	Uncharacterized protein. (1665 aa)
	VDAG_06329	2-succinylbenzoate-CoA ligase. (580 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_00146	VDAG_01351	G2WRG3	G2WU78	ATP-dependent RNA helicase DBP5.	Nucleoporin GLE1.	0.975
VDAG_00146	VDAG_04257	G2WRG3	G2X1T3	ATP-dependent RNA helicase DBP5.	Uncharacterized protein.	0.993
VDAG_00146	VDAG_04456	G2WRG3	G2X2D2	ATP-dependent RNA helicase DBP5.	Nuclear pore glycoprotein p62.	0.819
VDAG_00146	VDAG_07456	G2WRG3	G2XB26	ATP-dependent RNA helicase DBP5.	Nucleoporin nup189.	0.421
VDAG_00205	VDAG_05875	G2WRM2	G2X6U3	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.426
VDAG_00205	VDAG_07456	G2WRM2	G2XB26	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Nucleoporin nup189.	0.825
VDAG_00205	VDAG_08795	G2WRM2	G2XF63	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.854
VDAG_00412	VDAG_00742	G2WS79	G2WQV0	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin Nup157/170.	0.993
VDAG_00412	VDAG_01219	G2WS79	G2WTU6	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin NIC96.	0.994
VDAG_00412	VDAG_01351	G2WS79	G2WU78	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin GLE1.	0.902
VDAG_00412	VDAG_01751	G2WS79	G2WVW5	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.764
VDAG_00412	VDAG_02729	G2WS79	G2WWV0	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin nup44.	0.978
VDAG_00412	VDAG_04257	G2WS79	G2X1T3	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.993
VDAG_00412	VDAG_04456	G2WS79	G2X2D2	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nuclear pore glycoprotein p62.	0.999
VDAG_00412	VDAG_05438	G2WS79	G2X5D3	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	TPR_MLP1_2 domain-containing protein.	0.545
VDAG_00412	VDAG_05737	G2WS79	G2X6F5	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nup188_C domain-containing protein.	0.419
VDAG_00412	VDAG_05897	G2WS79	G2X6W5	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.992
VDAG_00412	VDAG_07456	G2WS79	G2XB26	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Nucleoporin nup189.	0.976
VDAG_00412	VDAG_08161	G2WS79	G2XDC9	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.764
VDAG_00412	VDAG_08541	G2WS79	G2XEF6	Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.	Uncharacterized protein.	0.999