6 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_08425	DNA-directed RNA polymerase II. (151 aa)
	VDAG_00690	DNA-directed RNA polymerases I. (231 aa)
	VDAG_06451	DNA-directed RNA polymerases I. (149 aa)
	VDAG_06114	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1755 aa)
	VDAG_07068	DNA-directed RNA polymerase II subunit RPB3. (342 aa)
	VDAG_09493	Uncharacterized protein. (420 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_00690	VDAG_06114	G2WQP8	G2X8H3	DNA-directed RNA polymerases I.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
VDAG_00690	VDAG_06451	G2WQP8	G2X7J3	DNA-directed RNA polymerases I.	DNA-directed RNA polymerases I.	0.999
VDAG_00690	VDAG_07068	G2WQP8	G2XAG5	DNA-directed RNA polymerases I.	DNA-directed RNA polymerase II subunit RPB3.	0.999
VDAG_00690	VDAG_08425	G2WQP8	G2XE43	DNA-directed RNA polymerases I.	DNA-directed RNA polymerase II.	0.999
VDAG_06114	VDAG_00690	G2X8H3	G2WQP8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I.	0.999
VDAG_06114	VDAG_06451	G2X8H3	G2X7J3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I.	0.999
VDAG_06114	VDAG_07068	G2X8H3	G2XAG5	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II subunit RPB3.	0.999
VDAG_06114	VDAG_08425	G2X8H3	G2XE43	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II.	0.999
VDAG_06451	VDAG_00690	G2X7J3	G2WQP8	DNA-directed RNA polymerases I.	DNA-directed RNA polymerases I.	0.999
VDAG_06451	VDAG_06114	G2X7J3	G2X8H3	DNA-directed RNA polymerases I.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
VDAG_06451	VDAG_07068	G2X7J3	G2XAG5	DNA-directed RNA polymerases I.	DNA-directed RNA polymerase II subunit RPB3.	0.999
VDAG_06451	VDAG_08425	G2X7J3	G2XE43	DNA-directed RNA polymerases I.	DNA-directed RNA polymerase II.	0.999
VDAG_07068	VDAG_00690	G2XAG5	G2WQP8	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerases I.	0.999
VDAG_07068	VDAG_06114	G2XAG5	G2X8H3	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
VDAG_07068	VDAG_06451	G2XAG5	G2X7J3	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerases I.	0.999
VDAG_07068	VDAG_08425	G2XAG5	G2XE43	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase II.	0.999
VDAG_08425	VDAG_00690	G2XE43	G2WQP8	DNA-directed RNA polymerase II.	DNA-directed RNA polymerases I.	0.999
VDAG_08425	VDAG_06114	G2XE43	G2X8H3	DNA-directed RNA polymerase II.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
VDAG_08425	VDAG_06451	G2XE43	G2X7J3	DNA-directed RNA polymerase II.	DNA-directed RNA polymerases I.	0.999
VDAG_08425	VDAG_07068	G2XE43	G2XAG5	DNA-directed RNA polymerase II.	DNA-directed RNA polymerase II subunit RPB3.	0.999