17 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_06824	mRNA 3'-end-processing protein YTH1. (395 aa)
	VDAG_06928	Endoribonuclease YSH1. (837 aa)
	VDAG_00125	Nuclear polyadenylated RNA-binding protein. (484 aa)
	VDAG_00026	MPE1 protein. (634 aa)
	VDAG_09937	Cleavage and polyadenylation specificity factor subunit 2. (972 aa)
	VDAG_09844	mRNA 3'-end-processing protein RNA14. (990 aa)
	VDAG_05766	Cleavage and polyadenylation specificity factor subunit 5. (268 aa)
	VDAG_04254	RNA-binding protein. (306 aa)
	VDAG_03300	DUF3453 domain-containing protein. (719 aa)
	VDAG_03291	RRM domain-containing protein. (149 aa)
	VDAG_02582	C3H1-type domain-containing protein. (1389 aa)
	VDAG_02485	RRM domain-containing protein. (361 aa)
	VDAG_08160	Pre-mRNA polyadenylation factor FIP1. (343 aa)
	VDAG_01018	RNA polymerase II subunit A C-terminal domain phosphatase SSU72. (258 aa)
	VDAG_06445	Polyadenylation factor subunit 2. (540 aa)
	VDAG_06137	Cft-1. (1445 aa)
	VDAG_06770	CID domain-containing protein. (499 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_00026	VDAG_01018	G2WR43	G2WT95	MPE1 protein.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.994
VDAG_00026	VDAG_03291	G2WR43	G2WZ49	MPE1 protein.	RRM domain-containing protein.	0.470
VDAG_00026	VDAG_03300	G2WR43	G2WZ58	MPE1 protein.	DUF3453 domain-containing protein.	0.977
VDAG_00026	VDAG_04254	G2WR43	G2X1T0	MPE1 protein.	RNA-binding protein.	0.916
VDAG_00026	VDAG_06137	G2WR43	G2X8J6	MPE1 protein.	Cft-1.	0.998
VDAG_00026	VDAG_06445	G2WR43	G2X7I7	MPE1 protein.	Polyadenylation factor subunit 2.	0.998
VDAG_00026	VDAG_06770	G2WR43	G2X9D8	MPE1 protein.	CID domain-containing protein.	0.873
VDAG_00026	VDAG_06824	G2WR43	G2X9J2	MPE1 protein.	mRNA 3'-end-processing protein YTH1.	0.998
VDAG_00026	VDAG_06928	G2WR43	G2XA25	MPE1 protein.	Endoribonuclease YSH1.	0.998
VDAG_00026	VDAG_08160	G2WR43	G2XDC8	MPE1 protein.	Pre-mRNA polyadenylation factor FIP1.	0.991
VDAG_00026	VDAG_09844	G2WR43	G2XI62	MPE1 protein.	mRNA 3'-end-processing protein RNA14.	0.780
VDAG_00026	VDAG_09937	G2WR43	G2XIF5	MPE1 protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.997
VDAG_00125	VDAG_03291	G2WRE2	G2WZ49	Nuclear polyadenylated RNA-binding protein.	RRM domain-containing protein.	0.539
VDAG_00125	VDAG_04254	G2WRE2	G2X1T0	Nuclear polyadenylated RNA-binding protein.	RNA-binding protein.	0.933
VDAG_00125	VDAG_06137	G2WRE2	G2X8J6	Nuclear polyadenylated RNA-binding protein.	Cft-1.	0.515
VDAG_00125	VDAG_06770	G2WRE2	G2X9D8	Nuclear polyadenylated RNA-binding protein.	CID domain-containing protein.	0.543
VDAG_00125	VDAG_06824	G2WRE2	G2X9J2	Nuclear polyadenylated RNA-binding protein.	mRNA 3'-end-processing protein YTH1.	0.485
VDAG_00125	VDAG_06928	G2WRE2	G2XA25	Nuclear polyadenylated RNA-binding protein.	Endoribonuclease YSH1.	0.411
VDAG_00125	VDAG_09844	G2WRE2	G2XI62	Nuclear polyadenylated RNA-binding protein.	mRNA 3'-end-processing protein RNA14.	0.697
VDAG_01018	VDAG_00026	G2WT95	G2WR43	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	MPE1 protein.	0.994