(135 nodes) Ribosomal subunit network (Verticillium dahliae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_01802	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (63 aa)
	VDAG_01944	50S ribosomal protein Mrp49. (199 aa)
	VDAG_01948	Urease accessory protein ureG. (273 aa)
	VDAG_01978	60S ribosomal protein L26-1. (136 aa)
	VDAG_02440	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (191 aa)
	VDAG_02441	60S ribosomal protein L21-B. (160 aa)
	VDAG_02494	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	VDAG_02496	Uncharacterized protein. (404 aa)
	VDAG_02507	60S ribosomal protein L14-B. (147 aa)
	VDAG_02518	60S ribosomal protein L24. (160 aa)
	VDAG_02602	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (136 aa)
	VDAG_03129	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (106 aa)
	VDAG_03283	60S acidic ribosomal protein P2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
	VDAG_03285	Uncharacterized protein. (210 aa)
	VDAG_03315	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	VDAG_00508	Uncharacterized protein. (186 aa)
	VDAG_00525	50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (152 aa)
	VDAG_00733	54S ribosomal protein L3. (413 aa)
	VDAG_00737	S4 RNA-binding domain-containing protein. (515 aa)
	VDAG_00761	Uncharacterized protein. (210 aa)
	VDAG_00058	40S ribosomal protein S19. (152 aa)
	VDAG_00092	Uncharacterized protein. (202 aa)
	VDAG_00178	60S ribosomal protein L22. (126 aa)
	VDAG_00181	Uncharacterized protein. (207 aa)
	VDAG_00346	ADP-ribosylation factor GTPase-activating protein GCS1. (378 aa)
	VDAG_00416	Uncharacterized protein. (68 aa)
	VDAG_01592	Uncharacterized protein. (105 aa)
	VDAG_01625	Ribosomal_S7 domain-containing protein. (314 aa)
	VDAG_00899	54S ribosomal protein L9. (337 aa)
	VDAG_00978	60S ribosomal protein L31. (123 aa)
	VDAG_01034	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	VDAG_01035	Uncharacterized protein. (303 aa)
	VDAG_01079	60S ribosomal protein L20. (209 aa)
	VDAG_01114	Mitochondrial 37S ribosomal protein S8. (162 aa)
	VDAG_01151	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (110 aa)
	VDAG_01255	54S ribosomal protein L24. (281 aa)
	VDAG_01335	Uncharacterized protein. (910 aa)
	VDAG_01336	60S ribosomal protein L4-B. (352 aa)
	VDAG_01404	IGR domain-containing protein. (225 aa)
	VDAG_01416	Mitochondrial 37S ribosomal protein SWS2; Belongs to the universal ribosomal protein uS13 family. (119 aa)
	VDAG_01457	Uncharacterized protein. (56 aa)
	VDAG_01484	50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (203 aa)
	VDAG_01488	37S ribosomal protein S24. (231 aa)
	VDAG_01508	60S ribosomal protein L5. (299 aa)
	VDAG_01729	Mitochondrial 40S ribosomal protein MRP2. (113 aa)
	VDAG_01733	40S ribosomal protein S27. (82 aa)
	VDAG_03460	Mitochondrial ribosomal protein S18. (248 aa)
	VDAG_03752	Uncharacterized protein. (241 aa)
	VDAG_03918	60S ribosomal protein L27-A. (135 aa)
	VDAG_04000	40S ribosomal protein mrp4. (396 aa)
	VDAG_03591	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	VDAG_04237	Uncharacterized protein. (496 aa)
	VDAG_04294	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
	VDAG_04314	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (64 aa)
	VDAG_04358	60S ribosomal protein L35. (125 aa)
	VDAG_04364	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (202 aa)
	VDAG_04460	Mitoc_mL59 domain-containing protein. (166 aa)
	VDAG_04489	60S ribosomal protein L33-B. (109 aa)
	VDAG_04123	Mitochondrial ribosomal protein L44. (98 aa)
	VDAG_04174	Superoxide dismutase. (308 aa)
	VDAG_04560	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	VDAG_04596	40S ribosomal protein S28. (68 aa)
	VDAG_04631	Uncharacterized protein. (535 aa)
	VDAG_04646	Uncharacterized protein. (198 aa)
	VDAG_04766	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (251 aa)
	VDAG_05472	Uncharacterized protein. (394 aa)
	VDAG_05663	60S ribosomal protein L34-B. (148 aa)
	VDAG_05679	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	VDAG_05693	54S ribosomal protein L23. (179 aa)
	VDAG_05698	60S ribosomal protein L32. (131 aa)
	VDAG_05786	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)
	VDAG_05789	60S ribosomal protein L39. (51 aa)
	VDAG_05828	Uncharacterized protein. (210 aa)
	VDAG_05892	Mitochondrial 54S ribosomal protein L51. (137 aa)
	VDAG_05940	60S ribosomal protein L2. (254 aa)
	VDAG_06306	60S ribosomal protein L23a. (157 aa)
	VDAG_06316	60S ribosomal protein L28. (158 aa)
	VDAG_06562	50S ribosomal subunit L30. (326 aa)
	VDAG_06273	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	VDAG_06045	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (261 aa)
	VDAG_06246	40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (87 aa)
	VDAG_06600	30S ribosomal protein S10. (239 aa)
	VDAG_06608	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (63 aa)
	VDAG_06682	60S ribosomal protein L18. (183 aa)
	VDAG_06690	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (193 aa)
	VDAG_06695	Mitochondrial large ribosomal subunit protein; Belongs to the universal ribosomal protein uL22 family. (311 aa)
	VDAG_06768	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (203 aa)
	VDAG_07170	Uncharacterized protein. (132 aa)
	VDAG_06894	37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (494 aa)
	VDAG_06906	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (240 aa)
	VDAG_06918	KOW motif domain-containing protein. (324 aa)
	VDAG_06970	Ribosomal_L30 domain-containing protein; Belongs to the universal ribosomal protein uL30 family. (96 aa)
	VDAG_07059	54S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family. (251 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (288 aa)
	VDAG_07090	Uncharacterized protein. (319 aa)
	VDAG_07096	Mitochondrial ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (93 aa)
	VDAG_07204	60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family. (202 aa)
	VDAG_07517	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (207 aa)
	VDAG_07518	Uncharacterized protein. (479 aa)
	VDAG_07533	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (93 aa)
	VDAG_07751	37S ribosomal protein Rsm25. (278 aa)
	VDAG_07875	Uncharacterized protein. (171 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	VDAG_08355	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (336 aa)
	VDAG_08443	54S ribosomal protein L7. (356 aa)
	VDAG_08470	Nucleolar GTP-binding protein. (643 aa)
	VDAG_08577	60S ribosomal protein L10-B. (222 aa)
	VDAG_08578	60S ribosomal protein L30. (110 aa)
	VDAG_08768	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (419 aa)
	VDAG_08793	60S ribosomal protein L9. (193 aa)
	VDAG_08839	50S ribosomal protein L2. (392 aa)
	VDAG_08999	50S ribosomal protein L4. (271 aa)
	VDAG_08883	Uncharacterized protein. (104 aa)
	VDAG_08928	40S ribosomal protein S10-A. (167 aa)
	VDAG_09243	Uncharacterized protein. (482 aa)
	VDAG_09244	50S ribosomal protein L4. (320 aa)
	VDAG_09497	Eukaryotic translation initiation factor 2A. (721 aa)
	VDAG_09547	60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (149 aa)
	VDAG_09722	Mitochondrial 54S ribosomal protein L38; Belongs to the universal ribosomal protein uL14 family. (128 aa)
	VDAG_09576	Uncharacterized protein. (151 aa)
	VDAG_09603	37S ribosomal protein Mrp17. (156 aa)
	VDAG_09676	54S ribosomal protein L10. (343 aa)
	VDAG_09907	37S ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (176 aa)
	VDAG_09954	Uncharacterized protein. (164 aa)
	VDAG_09961	Uncharacterized protein. (140 aa)
	VDAG_09979	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (80 aa)
	VDAG_10073	54S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family. (249 aa)
	VDAG_10225	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	VDAG_10226	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (148 aa)
	VDAG_10228	60S ribosomal protein L43. (92 aa)
	VDAG_10348	60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family. (172 aa)
	VDAG_10310	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	VDAG_10447	40S ribosomal protein S17. (148 aa)
	VDAG_10491	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (121 aa)
	VDAG_10492	40S ribosomal protein S27a. (153 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPS0	RPS1	G2XAI6	G2XDR2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
RPS0	VDAG_00058	G2XAI6	G2WR75	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S19.	0.999
RPS0	VDAG_00092	G2XAI6	G2WRA9	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.691
RPS0	VDAG_00178	G2XAI6	G2WRJ5	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L22.	0.998
RPS0	VDAG_00181	G2XAI6	G2WRJ8	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.961
RPS0	VDAG_00416	G2XAI6	G2WS83	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.991
RPS0	VDAG_00508	G2XAI6	G2WQ66	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.880
RPS0	VDAG_00525	G2XAI6	G2WQ83	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.	0.905
RPS0	VDAG_00733	G2XAI6	G2WQU1	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	54S ribosomal protein L3.	0.586
RPS0	VDAG_00737	G2XAI6	G2WQU5	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	S4 RNA-binding domain-containing protein.	0.991
RPS0	VDAG_00761	G2XAI6	G2WQY0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.741
RPS0	VDAG_00899	G2XAI6	G2WSX6	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	54S ribosomal protein L9.	0.908
RPS0	VDAG_00978	G2XAI6	G2WT55	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L31.	0.999
RPS0	VDAG_01034	G2XAI6	G2WTB1	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.990
RPS0	VDAG_01035	G2XAI6	G2WTB2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.989
RPS0	VDAG_01079	G2XAI6	G2WTF6	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	60S ribosomal protein L20.	0.999
RPS0	VDAG_01114	G2XAI6	G2WTJ1	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Mitochondrial 37S ribosomal protein S8.	0.986
RPS0	VDAG_01151	G2XAI6	G2WTM8	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.977
RPS0	VDAG_01255	G2XAI6	G2WTY2	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	54S ribosomal protein L24.	0.979
RPS0	VDAG_01335	G2XAI6	G2WU62	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	Uncharacterized protein.	0.982