STRINGSTRING
VDAG_01644 VDAG_01644 VDAG_10422 VDAG_10422 VDAG_00969 VDAG_00969 VDAG_08828 VDAG_08828
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_01644Pre-mRNA-splicing factor slt-11. (381 aa)
VDAG_10422Pre-mRNA-splicing factor SYF1. (822 aa)
VDAG_00969U5 small nuclear ribonucleoprotein component. (983 aa)
VDAG_08828Pre-mRNA-splicing factor clf1. (673 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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