10 items (Verticillium dahliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VDAG_00969	U5 small nuclear ribonucleoprotein component. (983 aa)
	VDAG_00964	Uncharacterized protein. (278 aa)
	VDAG_01132	Pre-mRNA-processing factor 17. (531 aa)
	VDAG_01644	Pre-mRNA-splicing factor slt-11. (381 aa)
	VDAG_04131	Peptidyl-prolyl cis-trans isomerase cyp15. (620 aa)
	VDAG_06268	Uncharacterized protein. (494 aa)
	VDAG_08421	Mitogen-activated protein kinase organizer 1. (254 aa)
	VDAG_08828	Pre-mRNA-splicing factor clf1. (673 aa)
	VDAG_08924	Peptidyl-prolyl cis-trans isomerase E. (153 aa)
	VDAG_10422	Pre-mRNA-splicing factor SYF1. (822 aa)

Your Current Organism:

Verticillium dahliae

NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VDAG_00964	VDAG_00969	G2WT41	G2WT46	Uncharacterized protein.	U5 small nuclear ribonucleoprotein component.	0.551
VDAG_00964	VDAG_01132	G2WT41	G2WTK9	Uncharacterized protein.	Pre-mRNA-processing factor 17.	0.690
VDAG_00964	VDAG_01644	G2WT41	G2WVK8	Uncharacterized protein.	Pre-mRNA-splicing factor slt-11.	0.489
VDAG_00964	VDAG_04131	G2WT41	G2X2T7	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase cyp15.	0.525
VDAG_00964	VDAG_08828	G2WT41	G2XF96	Uncharacterized protein.	Pre-mRNA-splicing factor clf1.	0.489
VDAG_00964	VDAG_08924	G2WT41	G2XGD7	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase E.	0.529
VDAG_00964	VDAG_10422	G2WT41	G2XJU0	Uncharacterized protein.	Pre-mRNA-splicing factor SYF1.	0.518
VDAG_00969	VDAG_00964	G2WT46	G2WT41	U5 small nuclear ribonucleoprotein component.	Uncharacterized protein.	0.551
VDAG_00969	VDAG_01132	G2WT46	G2WTK9	U5 small nuclear ribonucleoprotein component.	Pre-mRNA-processing factor 17.	0.994
VDAG_00969	VDAG_01644	G2WT46	G2WVK8	U5 small nuclear ribonucleoprotein component.	Pre-mRNA-splicing factor slt-11.	0.992
VDAG_00969	VDAG_04131	G2WT46	G2X2T7	U5 small nuclear ribonucleoprotein component.	Peptidyl-prolyl cis-trans isomerase cyp15.	0.527
VDAG_00969	VDAG_08828	G2WT46	G2XF96	U5 small nuclear ribonucleoprotein component.	Pre-mRNA-splicing factor clf1.	0.995
VDAG_00969	VDAG_08924	G2WT46	G2XGD7	U5 small nuclear ribonucleoprotein component.	Peptidyl-prolyl cis-trans isomerase E.	0.735
VDAG_00969	VDAG_10422	G2WT46	G2XJU0	U5 small nuclear ribonucleoprotein component.	Pre-mRNA-splicing factor SYF1.	0.995
VDAG_01132	VDAG_00964	G2WTK9	G2WT41	Pre-mRNA-processing factor 17.	Uncharacterized protein.	0.690
VDAG_01132	VDAG_00969	G2WTK9	G2WT46	Pre-mRNA-processing factor 17.	U5 small nuclear ribonucleoprotein component.	0.994
VDAG_01132	VDAG_01644	G2WTK9	G2WVK8	Pre-mRNA-processing factor 17.	Pre-mRNA-splicing factor slt-11.	0.994
VDAG_01132	VDAG_04131	G2WTK9	G2X2T7	Pre-mRNA-processing factor 17.	Peptidyl-prolyl cis-trans isomerase cyp15.	0.973
VDAG_01132	VDAG_06268	G2WTK9	G2X801	Pre-mRNA-processing factor 17.	Uncharacterized protein.	0.719
VDAG_01132	VDAG_08421	G2WTK9	G2XE39	Pre-mRNA-processing factor 17.	Mitogen-activated protein kinase organizer 1.	0.479