STRINGSTRING
VDAG_06204 VDAG_06204 VDAG_10405 VDAG_10405 VDAG_00782 VDAG_00782 katG katG VDAG_03116 VDAG_03116 VDAG_03705 VDAG_03705 katG-2 katG-2 VDAG_01449 VDAG_01449
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_06204Peroxidase; Belongs to the peroxidase family. Ligninase subfamily. (352 aa)
VDAG_10405Peroxidase; Belongs to the peroxidase family. Ligninase subfamily. (419 aa)
VDAG_00782Peroxidase; Belongs to the peroxidase family. (394 aa)
katGCatalase-peroxidase; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (762 aa)
VDAG_03116Peroxidase; Belongs to the peroxidase family. (362 aa)
VDAG_03705Peroxidase; Belongs to the peroxidase family. (515 aa)
katG-2Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity. Confers resistance to H(2)O(2) in hyphae. May play an antioxidative role in fungal defense against the host-produced H(2)O(2) (oxidative burst) at the early stage of plant infection. (772 aa)
VDAG_01449Uncharacterized protein; Belongs to the peroxidase family. (1021 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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