STRINGSTRING
VDAG_07238 VDAG_07238 VDAG_08154 VDAG_08154 VDAG_08067 VDAG_08067 VDAG_07759 VDAG_07759 VDAG_07566 VDAG_07566 VDAG_07242 VDAG_07242 VDAG_07144 VDAG_07144 VDAG_05344 VDAG_05344 VDAG_05402 VDAG_05402 VDAG_04718 VDAG_04718 VDAG_03656 VDAG_03656 VDAG_02904 VDAG_02904 VDAG_02886 VDAG_02886 VDAG_02709 VDAG_02709
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_07238Pectin lyase. (376 aa)
VDAG_08154Pectin lyase. (388 aa)
VDAG_08067Pectate lyase B. (303 aa)
VDAG_07759Pectate lyase B. (331 aa)
VDAG_07566Pectate lyase. (322 aa)
VDAG_07242Pectate lyase. (337 aa)
VDAG_07144Pectin lyase. (394 aa)
VDAG_05344Pectate lyase B. (380 aa)
VDAG_05402Pectate lyase. (325 aa)
VDAG_04718Pectate lyase B. (333 aa)
VDAG_03656Pectin lyase B. (415 aa)
VDAG_02904Pectate lyase B. (369 aa)
VDAG_02886Pectate lyase B. (339 aa)
VDAG_02709Pectate lyase. (326 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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