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VDAG_05743 VDAG_05743 VDAG_07725 VDAG_07725 VDAG_09093 VDAG_09093 VDAG_09050 VDAG_09050 VDAG_09354 VDAG_09354 VDAG_05446 VDAG_05446 VDAG_04571 VDAG_04571 VDAG_06397 VDAG_06397 VDAG_04729 VDAG_04729
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_05743Ornithine aminotransferase. (447 aa)
VDAG_07725Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (440 aa)
VDAG_090932,2-dialkylglycine decarboxylase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (442 aa)
VDAG_090502,2-dialkylglycine decarboxylase. (286 aa)
VDAG_09354Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. (807 aa)
VDAG_05446Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
VDAG_045714-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
VDAG_063974-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (502 aa)
VDAG_04729Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (474 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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