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VDAG_08338 VDAG_08338 VDAG_00894 VDAG_00894 VDAG_07985 VDAG_07985 VDAG_08371 VDAG_08371 VDAG_02005 VDAG_02005 VDAG_03244 VDAG_03244 VDAG_04328 VDAG_04328 VDAG_00165 VDAG_00165
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_08338Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (1357 aa)
VDAG_00894ATP-dependent RNA helicase DHX8. (675 aa)
VDAG_07985Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22. (1190 aa)
VDAG_08371ATP-dependent RNA helicase DHX8. (1191 aa)
VDAG_02005Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (770 aa)
VDAG_03244Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16. (963 aa)
VDAG_04328Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43. (798 aa)
VDAG_00165Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (973 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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