STRINGSTRING
VDAG_04652 VDAG_04652 VDAG_09009 VDAG_09009 VDAG_08545 VDAG_08545 VDAG_06495 VDAG_06495 VDAG_01251 VDAG_01251 VDAG_01960 VDAG_01960 VDAG_01971 VDAG_01971 VDAG_03212 VDAG_03212 VDAG_04308 VDAG_04308 VDAG_05524 VDAG_05524 VDAG_00315 VDAG_00315 VDAG_00357 VDAG_00357
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_04652Branchpoint-bridging protein. (590 aa)
VDAG_09009Ribosomal RNA assembly protein mis3. (216 aa)
VDAG_08545Exosome complex exonuclease RRP4. (354 aa)
VDAG_06495Poly(RC)-binding protein. (514 aa)
VDAG_01251KH domain-containing protein. (589 aa)
VDAG_01960KH domain-containing protein. (524 aa)
VDAG_01971Branchpoint-bridging protein. (327 aa)
VDAG_03212Pre-rRNA-processing protein PNO1. (257 aa)
VDAG_04308Poly(RC)-binding protein. (477 aa)
VDAG_05524Uncharacterized protein. (1269 aa)
VDAG_00315Exosome complex exonuclease RRP40. (245 aa)
VDAG_00357KH domain-containing protein. (964 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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