STRINGSTRING
VDAG_10046 VDAG_10046 VDAG_06649 VDAG_06649 VDAG_06669 VDAG_06669 VDAG_06735 VDAG_06735 VDAG_06799 VDAG_06799 VDAG_06986 VDAG_06986 VDAG_07092 VDAG_07092 VDAG_07353 VDAG_07353 VDAG_07435 VDAG_07435 VDAG_07453 VDAG_07453 VDAG_07456 VDAG_07456 VDAG_07497 VDAG_07497 VDAG_07507 VDAG_07507 VDAG_07523 VDAG_07523 VDAG_08102 VDAG_08102 VDAG_08156 VDAG_08156 VDAG_00523 VDAG_00523 VDAG_00604 VDAG_00604 VDAG_06000 VDAG_06000 VDAG_06102 VDAG_06102 VDAG_06226 VDAG_06226 VDAG_06227 VDAG_06227 VDAG_06619 VDAG_06619 VDAG_00742 VDAG_00742 VDAG_00139 VDAG_00139 VDAG_01925 VDAG_01925 VDAG_02001 VDAG_02001 VDAG_02729 VDAG_02729 VDAG_02786 VDAG_02786 VDAG_02409 VDAG_02409 VDAG_02557 VDAG_02557 VDAG_03374 VDAG_03374 VDAG_03397 VDAG_03397 VDAG_03517 VDAG_03517 VDAG_03554 VDAG_03554 VDAG_03000 VDAG_03000 VDAG_03024 VDAG_03024 VDAG_03874 VDAG_03874 VDAG_03969 VDAG_03969 VDAG_03593 VDAG_03593 VDAG_04257 VDAG_04257 VDAG_04304 VDAG_04304 VDAG_04315 VDAG_04315 VDAG_04316 VDAG_04316 VDAG_04415 VDAG_04415 VDAG_04418 VDAG_04418 VDAG_04456 VDAG_04456 VDAG_04479 VDAG_04479 VDAG_04575 VDAG_04575 VDAG_05128 VDAG_05128 VDAG_05230 VDAG_05230 VDAG_05264 VDAG_05264 VDAG_05438 VDAG_05438 VDAG_05565 VDAG_05565 VDAG_05571 VDAG_05571 VDAG_05646 VDAG_05646 VDAG_05689 VDAG_05689 VDAG_05737 VDAG_05737 VDAG_05838 VDAG_05838 VDAG_05871 VDAG_05871 VDAG_05875 VDAG_05875 VDAG_05897 VDAG_05897 VDAG_05936 VDAG_05936 VDAG_06319 VDAG_06319 VDAG_06418 VDAG_06418 VDAG_06558 VDAG_06558 VDAG_00265 VDAG_00265 VDAG_00270 VDAG_00270 VDAG_00288 VDAG_00288 VDAG_00380 VDAG_00380 VDAG_00412 VDAG_00412 VDAG_00861 VDAG_00861 VDAG_01178 VDAG_01178 VDAG_01204 VDAG_01204 VDAG_01219 VDAG_01219 VDAG_01511 VDAG_01511 VDAG_02130 VDAG_02130 VDAG_01751 VDAG_01751 VDAG_01776 VDAG_01776 VDAG_01848 VDAG_01848 VDAG_01876 VDAG_01876 VDAG_01877 VDAG_01877 VDAG_08161 VDAG_08161 VDAG_08271 VDAG_08271 VDAG_08327 VDAG_08327 VDAG_08467 VDAG_08467 VDAG_08485 VDAG_08485 VDAG_08541 VDAG_08541 VDAG_08650 VDAG_08650 VDAG_08702 VDAG_08702 VDAG_08782 VDAG_08782 VDAG_08795 VDAG_08795 VDAG_08823 VDAG_08823 VDAG_08959 VDAG_08959 VDAG_09248 VDAG_09248 VDAG_09252 VDAG_09252 VDAG_09396 VDAG_09396 VDAG_09439 VDAG_09439 VDAG_09708 VDAG_09708 VDAG_09741 VDAG_09741 VDAG_09691 VDAG_09691 VDAG_09692 VDAG_09692 VDAG_09899 VDAG_09899 VDAG_09949 VDAG_09949 VDAG_10112 VDAG_10112
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_10046Cinnamyl alcohol dehydrogenase. (363 aa)
VDAG_06649Dual specificity protein kinase YAK1. (934 aa)
VDAG_06669Uncharacterized protein. (590 aa)
VDAG_06735WD repeat-containing protein. (419 aa)
VDAG_06799Uncharacterized protein. (632 aa)
VDAG_06986Chromatin modification-related protein. (677 aa)
VDAG_07092Nucleolar protein NOP58. (655 aa)
VDAG_07353Uncharacterized protein. (443 aa)
VDAG_07435Centrin-3. (191 aa)
VDAG_07453DNA repair protein rhp41. (842 aa)
VDAG_07456Nucleoporin nup189. (1956 aa)
VDAG_07497Nuclear envelope protein. (638 aa)
VDAG_07507Alcohol dehydrogenase. (352 aa)
VDAG_07523ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (479 aa)
VDAG_08102Alcohol dehydrogenase. (347 aa)
VDAG_08156Uncharacterized protein. (241 aa)
VDAG_00523Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (116 aa)
VDAG_00604DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1743 aa)
VDAG_06000Histone deacetylase RPD3. (635 aa)
VDAG_06102G/U mismatch-specific uracil DNA glycosylase. (313 aa)
VDAG_06226Alcohol dehydrogenase. (341 aa)
VDAG_06227Uncharacterized protein. (703 aa)
VDAG_06619Forkhead box protein K2. (672 aa)
VDAG_00742Nucleoporin Nup157/170. (1396 aa)
VDAG_00139Uncharacterized protein. (1060 aa)
VDAG_01925zf-RING-like domain-containing protein. (279 aa)
VDAG_02001Uncharacterized protein. (418 aa)
VDAG_02729Nucleoporin nup44. (358 aa)
VDAG_02786Uncharacterized protein. (300 aa)
VDAG_02409SMT3 protein. (105 aa)
VDAG_02557MAGE domain-containing protein. (340 aa)
VDAG_03374PA14 domain-containing protein. (342 aa)
VDAG_03397Mannitol dehydrogenase. (305 aa)
VDAG_03517Chromatin structure-remodeling complex protein RSC7. (528 aa)
VDAG_03554Uncharacterized protein. (102 aa)
VDAG_03000Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (901 aa)
VDAG_03024Chromatin modification-related protein. (442 aa)
VDAG_03874NADP-dependent alcohol dehydrogenase. (289 aa)
VDAG_03969Alcohol dehydrogenase. (368 aa)
VDAG_03593Uncharacterized protein. (846 aa)
VDAG_04257Uncharacterized protein. (1563 aa)
VDAG_04304ATP-dependent helicase SGS1. (1518 aa)
VDAG_04315Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
VDAG_04316Vezatin domain-containing protein. (622 aa)
VDAG_04415Uncharacterized protein. (691 aa)
VDAG_04418Ran GTPase-activating protein. (375 aa)
VDAG_04456Nuclear pore glycoprotein p62. (721 aa)
VDAG_04479DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (909 aa)
VDAG_04575Structural maintenance of chromosomes protein. (1253 aa)
VDAG_05128BRCT domain-containing protein. (1031 aa)
VDAG_05230Uncharacterized protein. (208 aa)
VDAG_05264APH domain-containing protein. (437 aa)
VDAG_05438TPR_MLP1_2 domain-containing protein. (2093 aa)
VDAG_05565Uncharacterized protein. (183 aa)
VDAG_05571Uncharacterized protein. (284 aa)
VDAG_05646NADP-dependent alcohol dehydrogenase. (361 aa)
VDAG_05689ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (581 aa)
VDAG_05737Nup188_C domain-containing protein. (1795 aa)
VDAG_05838Alcohol dehydrogenase GroES domain-containing protein. (376 aa)
VDAG_05871Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
VDAG_05875Uncharacterized protein. (888 aa)
VDAG_05897Uncharacterized protein. (1665 aa)
VDAG_05936Meiosis-specific transcription factor mei4. (747 aa)
VDAG_06319MIZ zinc finger protein. (520 aa)
VDAG_06418Uncharacterized protein. (325 aa)
VDAG_06558Structural maintenance of chromosomes protein. (1198 aa)
VDAG_00265DNA repair and recombination protein RAD52. (532 aa)
VDAG_00270SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
VDAG_00288Uncharacterized protein. (286 aa)
VDAG_00380RanBD1 domain-containing protein. (491 aa)
VDAG_00412Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family. (544 aa)
VDAG_00861Uncharacterized protein. (134 aa)
VDAG_01178Alcohol dehydrogenase. (346 aa)
VDAG_01204Uncharacterized protein. (410 aa)
VDAG_01219Nucleoporin NIC96. (1177 aa)
VDAG_01511MIZ zinc finger domain-containing protein. (1085 aa)
VDAG_02130Uncharacterized protein. (824 aa)
VDAG_01751Uncharacterized protein. (997 aa)
VDAG_01776SMC_N domain-containing protein. (1117 aa)
VDAG_01848Poly(A)+ RNA export protein. (358 aa)
VDAG_01876Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (434 aa)
VDAG_01877Uncharacterized protein. (890 aa)
VDAG_08161Uncharacterized protein. (457 aa)
VDAG_08271YDG domain-containing protein. (375 aa)
VDAG_08327SCD domain-containing protein. (1175 aa)
VDAG_08467Uncharacterized protein. (306 aa)
VDAG_08485Cut12 domain-containing protein. (671 aa)
VDAG_08541Uncharacterized protein. (1407 aa)
VDAG_08650Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (617 aa)
VDAG_08702Double-strand-break repair protein rad21. (651 aa)
VDAG_08782Chromatin structure-remodeling complex protein RSC7. (489 aa)
VDAG_08795Uncharacterized protein. (1200 aa)
VDAG_08823GLCD beta. (527 aa)
VDAG_08959Uncharacterized protein. (266 aa)
VDAG_09248Cellulose-growth-specific protein. (223 aa)
VDAG_09252Uncharacterized protein. (264 aa)
VDAG_09396ATP-dependent DNA helicase RecQ. (677 aa)
VDAG_09439SMC_N domain-containing protein. (1166 aa)
VDAG_09708Alcohol dehydrogenase. (339 aa)
VDAG_09741NADP-dependent alcohol dehydrogenase. (360 aa)
VDAG_09691Uncharacterized protein. (786 aa)
VDAG_09692Ran-specific GTPase-activating protein. (257 aa)
VDAG_09899DNA repair protein rhp41. (1060 aa)
VDAG_09949CCCH zinc finger domain-containing protein. (599 aa)
VDAG_10112Uncharacterized protein. (358 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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