STRINGSTRING
VDAG_03186 VDAG_03186 VDAG_01803 VDAG_01803 VDAG_01089 VDAG_01089 VDAG_00994 VDAG_00994 VDAG_01612 VDAG_01612 VDAG_00385 VDAG_00385 VDAG_00727 VDAG_00727 VDAG_00690 VDAG_00690 VDAG_06114 VDAG_06114 VDAG_06076 VDAG_06076 VDAG_06745 VDAG_06745 VDAG_06619 VDAG_06619 VDAG_05936 VDAG_05936 VDAG_05689 VDAG_05689 VDAG_05625 VDAG_05625 VDAG_04645 VDAG_04645 VDAG_10430 VDAG_10430 cprA cprA VDAG_10182 VDAG_10182 VDAG_10143 VDAG_10143 VDAG_10130 VDAG_10130 VDAG_09909 VDAG_09909 VDAG_09415 VDAG_09415 VDAG_09400 VDAG_09400 VDAG_09011 VDAG_09011 VDAG_09010 VDAG_09010 VDAG_08811 VDAG_08811 VDAG_08751 VDAG_08751 VDAG_08425 VDAG_08425 VDAG_08414 VDAG_08414 VDAG_08361 VDAG_08361 VDAG_08347 VDAG_08347 VDAG_08218 VDAG_08218 VDAG_08217 VDAG_08217 VDAG_08202 VDAG_08202 VDAG_07801 VDAG_07801 VDAG_07099 VDAG_07099 VDAG_04477 VDAG_04477 VDAG_07068 VDAG_07068 VDAG_04432 VDAG_04432 VDAG_04392 VDAG_04392 VDAG_04069 VDAG_04069 VDAG_06451 VDAG_06451 VDAG_04035 VDAG_04035 VDAG_03014 VDAG_03014
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_03186Uncharacterized protein. (577 aa)
VDAG_01803Nitrogen regulatory protein areA. (982 aa)
VDAG_01089Histone acetyltransferase GCN5. (396 aa)
VDAG_00994DNA-directed RNA polymerases I/II/III subunit 10. (76 aa)
VDAG_01612TATA-box-binding protein. (249 aa)
VDAG_00385Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa)
VDAG_00727C-type cyclin; Belongs to the cyclin family. (482 aa)
VDAG_00690DNA-directed RNA polymerases I. (231 aa)
VDAG_06114DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1755 aa)
VDAG_06076Uncharacterized protein. (412 aa)
VDAG_06745Uncharacterized protein. (1735 aa)
VDAG_06619Forkhead box protein K2. (672 aa)
VDAG_05936Meiosis-specific transcription factor mei4. (747 aa)
VDAG_05689ATP-dependent RNA helicase DBP2; Belongs to the DEAD box helicase family. (581 aa)
VDAG_05625DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1260 aa)
VDAG_04645Heat shock protein. (701 aa)
VDAG_10430DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (152 aa)
cprANADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (693 aa)
VDAG_10182Uncharacterized protein. (275 aa)
VDAG_10143Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (518 aa)
VDAG_10130Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (722 aa)
VDAG_09909Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1149 aa)
VDAG_09415Histone H2B; Belongs to the histone H2B family. (137 aa)
VDAG_09400Uncharacterized protein. (190 aa)
VDAG_09011GATA type zinc finger protein Asd4. (377 aa)
VDAG_09010Uncharacterized protein. (159 aa)
VDAG_08811RPOL4c domain-containing protein. (160 aa)
VDAG_08751HNRNP arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (344 aa)
VDAG_08425DNA-directed RNA polymerase II. (151 aa)
VDAG_08414Uncharacterized protein. (325 aa)
VDAG_08361Serine/threonine-protein phosphatase. (478 aa)
VDAG_08347Serine/threonine-protein kinase BUR1; Belongs to the protein kinase superfamily. (436 aa)
VDAG_08218Uncharacterized protein. (1107 aa)
VDAG_08217Uncharacterized protein. (381 aa)
VDAG_08202Uncharacterized protein. (336 aa)
VDAG_07801Metallothionein-I transcription activator. (81 aa)
VDAG_07099Striatin Pro11. (844 aa)
VDAG_04477Lysine-specific histone demethylase. (1074 aa)
VDAG_07068DNA-directed RNA polymerase II subunit RPB3. (342 aa)
VDAG_04432Cyclin-K; Belongs to the cyclin family. (437 aa)
VDAG_04392DNA-directed RNA polymerase II subunit RPB7. (171 aa)
VDAG_04069Serine/threonine-protein kinase ksg1. (851 aa)
VDAG_06451DNA-directed RNA polymerases I. (149 aa)
VDAG_04035Glycosidase; Belongs to the glycosyl hydrolase 16 family. (420 aa)
VDAG_03014Transcription initiation factor iif. (368 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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