STRINGSTRING
VDAG_09511 VDAG_09511 VDAG_10444 VDAG_10444 VDAG_09820 VDAG_09820 VDAG_09816 VDAG_09816 VDAG_09351 VDAG_09351 VDAG_09306 VDAG_09306 VDAG_09238 VDAG_09238 VDAG_09103 VDAG_09103 VDAG_05445 VDAG_05445 VDAG_05109 VDAG_05109 VDAG_03873 VDAG_03873 VDAG_03806 VDAG_03806 VDAG_03545 VDAG_03545 VDAG_03335 VDAG_03335 VDAG_02650 VDAG_02650 VDAG_02649 VDAG_02649 VDAG_02598 VDAG_02598 VDAG_02754 VDAG_02754 VDAG_02206 VDAG_02206 VDAG_01359 VDAG_01359 VDAG_01282 VDAG_01282 VDAG_01047 VDAG_01047 VDAG_00992 VDAG_00992 VDAG_01603 VDAG_01603 VDAG_00260 VDAG_00260 VDAG_00598 VDAG_00598
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_09511Gibberellin 2-beta-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (348 aa)
VDAG_10444Glycosyl hydrolase. (398 aa)
VDAG_09820Thymine dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (289 aa)
VDAG_09816Uncharacterized protein. (245 aa)
VDAG_09351Uncharacterized protein. (552 aa)
VDAG_093062OG-Fe(II) oxygenase. (197 aa)
VDAG_09238Mannan endo-1,6-alpha-mannosidase. (462 aa)
VDAG_09103Mannan endo-1,6-alpha-mannosidase. (465 aa)
VDAG_05445Niemann-Pick C1 protein. (1273 aa)
VDAG_05109Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (362 aa)
VDAG_03873Naringenin 3-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (379 aa)
VDAG_03806Uncharacterized protein. (766 aa)
VDAG_03545Flavonol synthase. (370 aa)
VDAG_03335Gibberellin 20 oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (342 aa)
VDAG_02650Atg29_N domain-containing protein. (491 aa)
VDAG_02649Mannan endo-1,6-alpha-mannosidase DCW1. (595 aa)
VDAG_02598MFS hexose transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (508 aa)
VDAG_02754Flavonol synthase. (365 aa)
VDAG_022062OG-Fe(II) oxygenase family protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (442 aa)
VDAG_01359Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (312 aa)
VDAG_01282Mannan endo-1,6-alpha-mannosidase. (459 aa)
VDAG_01047Uncharacterized protein. (636 aa)
VDAG_00992Naringenin 3-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family. (390 aa)
VDAG_01603Uncharacterized protein. (371 aa)
VDAG_00260Mannan endo-1,6-alpha-mannosidase. (458 aa)
VDAG_00598Mannan endo-1,6-alpha-mannosidase. (451 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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