STRINGSTRING
VDAG_00270 VDAG_00270 VDAG_00412 VDAG_00412 VDAG_10488 VDAG_10488 VDAG_09949 VDAG_09949 VDAG_08795 VDAG_08795 VDAG_08541 VDAG_08541 VDAG_08161 VDAG_08161 VDAG_07497 VDAG_07497 VDAG_07456 VDAG_07456 VDAG_07338 VDAG_07338 VDAG_06735 VDAG_06735 VDAG_05897 VDAG_05897 VDAG_01219 VDAG_01219 VDAG_05737 VDAG_05737 VDAG_04418 VDAG_04418 VDAG_03593 VDAG_03593 VDAG_03745 VDAG_03745 VDAG_03006 VDAG_03006 VDAG_03000 VDAG_03000 VDAG_02409 VDAG_02409 VDAG_01751 VDAG_01751 VDAG_00742 VDAG_00742
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_00270SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
VDAG_00412Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family. (544 aa)
VDAG_10488ELYS domain-containing protein. (293 aa)
VDAG_09949CCCH zinc finger domain-containing protein. (599 aa)
VDAG_08795Uncharacterized protein. (1200 aa)
VDAG_08541Uncharacterized protein. (1407 aa)
VDAG_08161Uncharacterized protein. (457 aa)
VDAG_07497Nuclear envelope protein. (638 aa)
VDAG_07456Nucleoporin nup189. (1956 aa)
VDAG_07338RCC1 domain-containing protein. (665 aa)
VDAG_06735WD repeat-containing protein. (419 aa)
VDAG_05897Uncharacterized protein. (1665 aa)
VDAG_01219Nucleoporin NIC96. (1177 aa)
VDAG_05737Nup188_C domain-containing protein. (1795 aa)
VDAG_04418Ran GTPase-activating protein. (375 aa)
VDAG_03593Uncharacterized protein. (846 aa)
VDAG_03745Regulator of chromosome condensation. (405 aa)
VDAG_03006GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (218 aa)
VDAG_03000Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (901 aa)
VDAG_02409SMT3 protein. (105 aa)
VDAG_01751Uncharacterized protein. (997 aa)
VDAG_00742Nucleoporin Nup157/170. (1396 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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