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VDAG_00089 VDAG_00089 VDAG_00378 VDAG_00378 VDAG_01561 VDAG_01561 VDAG_02317 VDAG_02317 VDAG_02766 VDAG_02766 VDAG_03820 VDAG_03820 VDAG_04305 VDAG_04305 VDAG_04839 VDAG_04839 VDAG_04885 VDAG_04885 VDAG_05123 VDAG_05123 VDAG_05703 VDAG_05703 VDAG_05801 VDAG_05801 VDAG_05884 VDAG_05884 VDAG_07292 VDAG_07292 VDAG_07421 VDAG_07421 VDAG_07467 VDAG_07467 VDAG_07690 VDAG_07690 cyn1 cyn1 VDAG_08339 VDAG_08339 VDAG_10119 VDAG_10119
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VDAG_00089Glutamine synthetase. (357 aa)
VDAG_00378Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (910 aa)
VDAG_01561Nitrite reductase. (1106 aa)
VDAG_02317Formamidase. (454 aa)
VDAG_02766Glutamine synthetase; Belongs to the glutamine synthetase family. (483 aa)
VDAG_03820Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (134 aa)
VDAG_04305Nitrate/nitrite transporter. (516 aa)
VDAG_04839Nitrilase. (357 aa)
VDAG_04885Cyanide hydratase. (489 aa)
VDAG_05123Nitrate reductase. (1054 aa)
VDAG_05703NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (1053 aa)
VDAG_05801Uncharacterized protein. (171 aa)
VDAG_05884Glutamine synthetase. (359 aa)
VDAG_072922-nitropropane dioxygenase. (354 aa)
VDAG_07421Carbonic anhydrase. (271 aa)
VDAG_07467Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (225 aa)
VDAG_07690Nitrilase. (441 aa)
cyn1Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (166 aa)
VDAG_08339Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (435 aa)
VDAG_10119Aliphatic nitrilase. (323 aa)
Your Current Organism:
Verticillium dahliae
NCBI taxonomy Id: 498257
Other names: V. dahliae VdLs.17, Verticillium dahliae VdLs.17
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