Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM3 | LSM4 | G2XHY5 | G2WQI7 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM3 | LSM5 | G2XHY5 | G2XE44 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
| LSM3 | LSM8 | G2XHY5 | G2WYL5 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM3 | VDAG_00012 | G2XHY5 | G2WR29 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA-splicing factor prp1. | 0.970 |
| LSM3 | VDAG_00247 | G2XHY5 | G2WRR4 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.937 |
| LSM3 | VDAG_00399 | G2XHY5 | G2WS66 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.993 |
| LSM3 | VDAG_00538 | G2XHY5 | G2WQ96 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U2 small nuclear ribonucleoprotein A. | 0.901 |
| LSM3 | VDAG_00710 | G2XHY5 | G2WQR8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | C2H2-type domain-containing protein. | 0.946 |
| LSM3 | VDAG_00969 | G2XHY5 | G2WT46 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U5 small nuclear ribonucleoprotein component. | 0.990 |
| LSM3 | VDAG_01004 | G2XHY5 | G2WT81 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.714 |
| LSM3 | VDAG_01329 | G2XHY5 | G2WU56 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U4/U6.U5 tri-snRNP-associated protein. | 0.509 |
| LSM3 | VDAG_01644 | G2XHY5 | G2WVK8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA-splicing factor slt-11. | 0.459 |
| LSM3 | VDAG_01780 | G2XHY5 | G2WVZ4 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | ATP-dependent RNA helicase SUB2. | 0.535 |
| LSM3 | VDAG_01954 | G2XHY5 | G2WWG8 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U4/U6.U5 tri-snRNP-associated protein snu66. | 0.994 |
| LSM3 | VDAG_02007 | G2XHY5 | G2WWM1 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | LSM domain-containing protein. | 0.982 |
| LSM3 | VDAG_02556 | G2XHY5 | G2WY74 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Splicing factor subunit; Belongs to the SF3B5 family. | 0.897 |
| LSM3 | VDAG_02689 | G2XHY5 | G2WYK7 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA-splicing factor 38A. | 0.621 |
| LSM3 | VDAG_03032 | G2XHY5 | G2X009 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.970 |
| LSM3 | VDAG_03069 | G2XHY5 | G2X046 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pre-mRNA branch site protein p14. | 0.680 |
| LSM3 | VDAG_03182 | G2XHY5 | G2WYU0 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U2 small nuclear ribonucleoprotein B. | 0.766 |
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