STRINGSTRING
Pc12g12160 Pc12g12160 Pc12g04780 Pc12g04780 Pc12g10510 Pc12g10510 Pc13g07180 Pc13g07180 Pc14g01320 Pc14g01320 Pc16g05440 Pc16g05440 Pc16g04930 Pc16g04930 Pc18g03460 Pc18g03460 Pc18g04100 Pc18g04100 Pc18g01760 Pc18g01760 Pc18g02030 Pc18g02030 Pc20g01340 Pc20g01340 Pc20g07660 Pc20g07660 Pc20g09410 Pc20g09410 Pc20g10480 Pc20g10480 Pc21g15190 Pc21g15190 Pc21g19500 Pc21g19500 Pc21g11050 Pc21g11050 Pc21g07040 Pc21g07040 Pc21g02990 Pc21g02990 Pc21g03000 Pc21g03000 Pc21g11820 Pc21g11820 Pc21g08660 Pc21g08660 Pc22g01070 Pc22g01070 Pc22g11050 Pc22g11050 Pc22g08050 Pc22g08050 Pc22g12590 Pc22g12590 Pc22g08360 Pc22g08360 Pc22g13140 Pc22g13140 Pc22g04980 Pc22g04980 Pc22g10150 Pc22g10150
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Pc12g12160Pc12g12160 protein. (1208 aa)
Pc12g04780Pc12g04780 protein. (366 aa)
Pc12g10510Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (123 aa)
Pc13g07180Pc13g07180 protein. (212 aa)
Pc14g01320Pc14g01320 protein. (188 aa)
Pc16g05440Pc16g05440 protein. (1162 aa)
Pc16g04930Pc16g04930 protein. (519 aa)
Pc18g03460Pc18g03460 protein; Belongs to the DEAD box helicase family. (790 aa)
Pc18g04100Pc18g04100 protein. (2354 aa)
Pc18g01760Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
Pc18g02030Splicing factor subunit; Belongs to the SF3B5 family. (83 aa)
Pc20g01340Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (100 aa)
Pc20g07660Pc20g07660 protein. (519 aa)
Pc20g09410Pc20g09410 protein. (2205 aa)
Pc20g10480Small nuclear ribonucleoprotein G. (88 aa)
Pc21g15190Pc21g15190 protein. (503 aa)
Pc21g19500Pc21g19500 protein. (108 aa)
Pc21g11050Pc21g11050 protein. (247 aa)
Pc21g07040Pc21g07040 protein. (249 aa)
Pc21g02990Pc21g02990 protein. (88 aa)
Pc21g03000Pc21g03000 protein. (171 aa)
Pc21g11820Pc21g11820 protein. (370 aa)
Pc21g08660Small nuclear ribonucleoprotein Sm D2. (123 aa)
Pc22g01070Pc22g01070 protein. (1209 aa)
Pc22g11050Pc22g11050 protein. (580 aa)
Pc22g08050Pc22g08050 protein. (937 aa)
Pc22g12590Small nuclear ribonucleoprotein Sm D3. (117 aa)
Pc22g08360Pc22g08360 protein. (113 aa)
Pc22g13140Pc22g13140 protein. (670 aa)
Pc22g04980Pc22g04980 protein. (234 aa)
Pc22g10150Pc22g10150 protein. (983 aa)
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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