STRINGSTRING
Pc06g01510 Pc06g01510 Pc12g07350 Pc12g07350 Pc12g11400 Pc12g11400 Pc12g15360 Pc12g15360 Pc12g12250 Pc12g12250 Pc12g01100 Pc12g01100 Pc12g01110 Pc12g01110 Pc12g12440 Pc12g12440 Pc12g05100 Pc12g05100 Pc12g16450 Pc12g16450 Pc12g05490 Pc12g05490 Pc12g05980 Pc12g05980 Pc12g03030 Pc12g03030 Pc12g03390 Pc12g03390 Pc12g03400 Pc12g03400 Pc13g02950 Pc13g02950 Pc13g04110 Pc13g04110 Pc13g04230 Pc13g04230 Pc13g04320 Pc13g04320 Pc13g14690 Pc13g14690 Pc13g15170 Pc13g15170 Pc13g15780 Pc13g15780 Pc13g15860 Pc13g15860 Pc13g12850 Pc13g12850 Pc13g06540 Pc13g06540 Pc13g10670 Pc13g10670 Pc13g10740 Pc13g10740 Pc13g10840 Pc13g10840 Pc13g09690 Pc13g09690 Pc13g13890 Pc13g13890 Pc14g00760 Pc14g00760 Pc15g01750 Pc15g01750 Pc15g00590 Pc15g00590 Pc16g02600 Pc16g02600 Pc16g02510 Pc16g02510 Pc16g02300 Pc16g02300 Pc16g07740 Pc16g07740 Pc16g07580 Pc16g07580 Pc16g10310 Pc16g10310 Pc16g05330 Pc16g05330 Pc16g13990 Pc16g13990 Pc16g14080 Pc16g14080 Pc16g12080 Pc16g12080 Pc16g12200 Pc16g12200 Pc16g12350 Pc16g12350 Pc16g12370 Pc16g12370 Pc16g12480 Pc16g12480 Pc16g12690 Pc16g12690 Pc16g13800 Pc16g13800 Pc18g05090 Pc18g05090 Pc18g01030 Pc18g01030 Pc18g01370 Pc18g01370 Pc18g01520 Pc18g01520 Pc20g12070 Pc20g12070 Pc20g15120 Pc20g15120 Pc20g05030 Pc20g05030 Pc20g07870 Pc20g07870 Pc20g08080 Pc20g08080 Pc20g08590 Pc20g08590 Pc20g08600 Pc20g08600 Pc20g08910 Pc20g08910 Pc20g09050 Pc20g09050 Pc20g05620 Pc20g05620 Pc20g00450 Pc20g00450 Pc20g00540 Pc20g00540 Pc20g10490 Pc20g10490 Pc20g11740 Pc20g11740 Pc20g11790 Pc20g11790 Pc20g06450 Pc20g06450 Pc20g00960 Pc20g00960 Pc20g14430 Pc20g14430 Pc21g05420 Pc21g05420 Pc21g05750 Pc21g05750 Pc21g01240 Pc21g01240 Pc21g01260 Pc21g01260 Pc21g01270 Pc21g01270 Pc21g06060 Pc21g06060 Pc21g06340 Pc21g06340 Pc21g01870 Pc21g01870 Pc21g06450 Pc21g06450 Pc21g02570 Pc21g02570 Pc21g02580 Pc21g02580 Pc21g02820 Pc21g02820 Pc21g11480 Pc21g11480 Pc21g16090 Pc21g16090 Pc21g16250 Pc21g16250 Pc21g12070 Pc21g12070 Pc21g12680 Pc21g12680 Pc21g12760 Pc21g12760 Pc21g17890 Pc21g17890 Pc21g05130 Pc21g05130 Pc21g18130 Pc21g18130 Pc21g18140 Pc21g18140 Pc22g02300 Pc22g02300 Pc22g11160 Pc22g11160 Pc22g11660 Pc22g11660 Pc22g12040 Pc22g12040 Pc22g20460 Pc22g20460 Pc22g07860 Pc22g07860 Pc22g03540 Pc22g03540 Pc22g25300 Pc22g25300 Pc22g21200 Pc22g21200 Pc22g21370 Pc22g21370 Pc22g04170 Pc22g04170 Pc22g21540 Pc22g21540 Pc22g13510 Pc22g13510 Pc22g21780 Pc22g21780 Pc22g09130 Pc22g09130 Pc22g04800 Pc22g04800 Pc22g05120 Pc22g05120 Pc22g14760 Pc22g14760 Pc22g15250 Pc22g15250 Pc23g00050 Pc23g00050 Pc23g00830 Pc23g00830 Pc23g00970 Pc23g00970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Pc06g01510Pc06g01510 protein. (265 aa)
Pc12g07350Pc12g07350 protein. (335 aa)
Pc12g11400Pc12g11400 protein. (1115 aa)
Pc12g15360Uncharacterized protein. (277 aa)
Pc12g12250Pc12g12250 protein. (374 aa)
Pc12g01100Pc12g01100 protein. (217 aa)
Pc12g01110Pc12g01110 protein. (479 aa)
Pc12g12440Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
Pc12g05100Pc12g05100 protein. (1025 aa)
Pc12g16450Pc12g16450 protein. (427 aa)
Pc12g05490RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (641 aa)
Pc12g05980FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...] (558 aa)
Pc12g03030Pc12g03030 protein. (366 aa)
Pc12g03390Pc12g03390 protein. (167 aa)
Pc12g03400Pc12g03400 protein. (510 aa)
Pc13g02950DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (116 aa)
Pc13g04110DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
Pc13g04230Pc13g04230 protein. (481 aa)
Pc13g04320Pc13g04320 protein. (444 aa)
Pc13g14690Pc13g14690 protein. (225 aa)
Pc13g15170DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1448 aa)
Pc13g15780Pc13g15780 protein. (344 aa)
Pc13g15860Pc13g15860 protein. (62 aa)
Pc13g12850Pc13g12850 protein. (440 aa)
Pc13g06540RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (483 aa)
Pc13g10670Pc13g10670 protein. (265 aa)
Pc13g10740Pc13g10740 protein; Belongs to the cyclin family. (501 aa)
Pc13g10840Pc13g10840 protein. (561 aa)
Pc13g09690RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (792 aa)
Pc13g13890Pc13g13890 protein. (457 aa)
Pc14g00760Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (691 aa)
Pc15g01750Pc15g01750 protein. (306 aa)
Pc15g00590Pc15g00590 protein. (443 aa)
Pc16g02600Pc16g02600 protein. (262 aa)
Pc16g02510Pc16g02510 protein. (185 aa)
Pc16g02300Pc16g02300 protein. (435 aa)
Pc16g07740Pc16g07740 protein. (370 aa)
Pc16g07580Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (1015 aa)
Pc16g10310Pc16g10310 protein. (153 aa)
Pc16g05330Pc16g05330 protein. (286 aa)
Pc16g13990DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1733 aa)
Pc16g14080Pc16g14080 protein. (290 aa)
Pc16g12080Pc16g12080 protein. (257 aa)
Pc16g12200Pc16g12200 protein. (263 aa)
Pc16g12350DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1671 aa)
Pc16g12370Pc16g12370 protein. (795 aa)
Pc16g12480Pc16g12480 protein. (286 aa)
Pc16g12690Pc16g12690 protein. (234 aa)
Pc16g13800Pc16g13800 protein. (324 aa)
Pc18g05090Pc18g05090 protein. (348 aa)
Pc18g01030Pc18g01030 protein. (739 aa)
Pc18g01370Pc18g01370 protein. (586 aa)
Pc18g01520Pc18g01520 protein. (350 aa)
Pc20g12070Pc20g12070 protein. (570 aa)
Pc20g15120Pc20g15120 protein. (732 aa)
Pc20g05030Pc20g05030 protein. (609 aa)
Pc20g07870Pc20g07870 protein. (620 aa)
Pc20g08080Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. (1409 aa)
Pc20g08590Histone H2A; Belongs to the histone H2A family. (132 aa)
Pc20g08600Histone H2B; Belongs to the histone H2B family. (141 aa)
Pc20g08910Pc20g08910 protein. (249 aa)
Pc20g09050Pc20g09050 protein; Belongs to the protein kinase superfamily. (404 aa)
Pc20g05620Repressor of RNA polymerase III transcription MAF1; Mediator of diverse signals that repress RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA. Belongs to the MAF1 family. (331 aa)
Pc20g00450Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (121 aa)
Pc20g00540Pc20g00540 protein. (537 aa)
Pc20g10490Pc20g10490 protein. (1243 aa)
Pc20g11740Pc20g11740 protein. (170 aa)
Pc20g11790Pc20g11790 protein. (137 aa)
Pc20g06450Pc20g06450 protein. (148 aa)
Pc20g00960Pc20g00960 protein. (1197 aa)
Pc20g14430Pc20g14430 protein. (245 aa)
Pc21g05420Pc21g05420 protein. (185 aa)
Pc21g05750Pc21g05750 protein. (217 aa)
Pc21g01240Pc21g01240 protein. (442 aa)
Pc21g01260Pc21g01260 protein. (398 aa)
Pc21g01270Pc21g01270 protein. (473 aa)
Pc21g06060DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
Pc21g06340Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (239 aa)
Pc21g01870Pc21g01870 protein. (579 aa)
Pc21g06450Pc21g06450 protein. (374 aa)
Pc21g02570Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
Pc21g02580Pc21g02580 protein. (374 aa)
Pc21g02820Pc21g02820 protein. (322 aa)
Pc21g11480Pc21g11480 protein. (74 aa)
Pc21g16090Pc21g16090 protein. (822 aa)
Pc21g16250Pc21g16250 protein. (1078 aa)
Pc21g12070Pc21g12070 protein. (400 aa)
Pc21g12680DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
Pc21g12760DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (350 aa)
Pc21g17890Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. (120 aa)
Pc21g05130Pc21g05130 protein. (128 aa)
Pc21g18130DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (242 aa)
Pc21g18140Pc21g18140 protein. (647 aa)
Pc22g02300Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (295 aa)
Pc22g11160General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (450 aa)
Pc22g11660Pc22g11660 protein; Belongs to the cyclin family. (382 aa)
Pc22g12040Pc22g12040 protein. (264 aa)
Pc22g20460Pc22g20460 protein. (320 aa)
Pc22g07860DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1249 aa)
Pc22g03540Pc22g03540 protein. (669 aa)
Pc22g25300Pc22g25300 protein. (741 aa)
Pc22g21200Pc22g21200 protein. (639 aa)
Pc22g21370Pc22g21370 protein. (486 aa)
Pc22g04170DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (124 aa)
Pc22g21540Pc22g21540 protein. (690 aa)
Pc22g13510Pc22g13510 protein. (497 aa)
Pc22g21780DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1208 aa)
Pc22g09130DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
Pc22g04800Pc22g04800 protein. (642 aa)
Pc22g05120Pc22g05120 protein. (70 aa)
Pc22g14760Pc22g14760 protein; Belongs to the cyclin family. (419 aa)
Pc22g15250Pc22g15250 protein. (580 aa)
Pc23g00050Pc23g00050 protein. (244 aa)
Pc23g00830Pc23g00830 protein. (327 aa)
Pc23g00970Pc23g00970 protein. (659 aa)
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
Server load: low (12%) [HD]