STRINGSTRING
Pc21g12690 Pc21g12690 Pc21g02990 Pc21g02990 Pc21g03000 Pc21g03000 Pc21g03110 Pc21g03110 Pc22g03450 Pc22g03450 Pc22g19720 Pc22g19720 Pc16g04770 Pc16g04770 Pc18g03450 Pc18g03450 Pc20g01340 Pc20g01340 Pc20g10480 Pc20g10480 Pc13g07180 Pc13g07180 Pc12g10510 Pc12g10510 Pc12g08440 Pc12g08440 Pc12g08410 Pc12g08410 Pc21g08660 Pc21g08660 Pc21g03370 Pc21g03370 Pc21g07040 Pc21g07040
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Pc21g12690Pc21g12690 protein. (260 aa)
Pc21g02990Pc21g02990 protein. (88 aa)
Pc21g03000Pc21g03000 protein. (171 aa)
Pc21g03110Pc21g03110 protein. (1624 aa)
Pc22g03450U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (185 aa)
Pc22g19720Pc22g19720 protein. (757 aa)
Pc16g04770Pc16g04770 protein. (772 aa)
Pc18g03450Pc18g03450 protein. (584 aa)
Pc20g01340Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (100 aa)
Pc20g10480Small nuclear ribonucleoprotein G. (88 aa)
Pc13g07180Pc13g07180 protein. (212 aa)
Pc12g10510Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (123 aa)
Pc12g08440Pc12g08440 protein. (564 aa)
Pc12g08410Pc12g08410 protein. (284 aa)
Pc21g08660Small nuclear ribonucleoprotein Sm D2. (123 aa)
Pc21g03370Pc21g03370 protein. (394 aa)
Pc21g07040Pc21g07040 protein. (249 aa)
Your Current Organism:
Penicillium rubens
NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255
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