39 items (Penicillium rubens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Pc20g00740	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (256 aa)
	Pc20g01150	Pc20g01150 protein. (380 aa)
	Pc21g01440	Pc21g01440 protein. (315 aa)
	Pc21g19270	Pc21g19270 protein; Belongs to the AAA ATPase family. (820 aa)
	Pc21g11790	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (740 aa)
	Pc21g11800	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (326 aa)
	Pc22g02800	Pc22g02800 protein. (558 aa)
	Pc22g15750	Pc22g15750 protein. (645 aa)
	Pc22g15970	Pc22g15970 protein. (478 aa)
	Pc22g12200	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (591 aa)
	Pc22g25230	Pc22g25230 protein. (665 aa)
	Pc22g04020	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (900 aa)
	Pc22g21810	Pc22g21810 protein. (394 aa)
	lcl2	Long chronological lifespan protein 2; Probable component of the endoplasmic reticulum-associated degradation (ERAD) pathway. (122 aa)
	Pc22g14080	Pc22g14080 protein; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)
	Pc22g18530	Pc22g18530 protein. (1054 aa)
	Pc22g18540	Pc22g18540 protein. (360 aa)
	Pc22g18560	Pc22g18560 protein. (289 aa)
	Pc22g18830	Pc22g18830 protein. (584 aa)
	Pc22g14750	Pc22g14750 protein; Belongs to the ubiquitin-conjugating enzyme family. (236 aa)
	Pc12g10670	Pc12g10670 protein; Belongs to the heat shock protein 70 family. (673 aa)
	Pc13g03990	Pc13g03990 protein. (1517 aa)
	Pc13g04480	Pc13g04480 protein. (421 aa)
	Pc13g05780	Pc13g05780 protein. (765 aa)
	Pc13g05810	Pc13g05810 protein. (276 aa)
	Pc13g09930	Pc13g09930 protein. (306 aa)
	Pc14g01380	Pc14g01380 protein. (1857 aa)
	Pc14g01750	Pc14g01750 protein; Belongs to the AAA ATPase family. (390 aa)
	Pc14g01760	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (691 aa)
	Pc16g09020	Pc16g09020 protein. (1224 aa)
	Pc16g05860	Pc16g05860 protein. (355 aa)
	Pc16g10330	Pc16g10330 protein. (190 aa)
	Pc16g13980	Pc16g13980 protein. (908 aa)
	Pc16g14170	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (510 aa)
	Pc20g08230	Pc20g08230 protein. (333 aa)
	Pc20g00110	Pc20g00110 protein; Belongs to the WD repeat SEC13 family. (309 aa)
	Pc20g09200	Pc20g09200 protein. (496 aa)
	Pc20g09900	Pc20g09900 protein. (757 aa)
	Pc20g11730	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (288 aa)

Your Current Organism:

Penicillium rubens

NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Pc12g10670	Pc13g04480	B6H0S5	B6H2A0	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc13g04480 protein.	0.943
Pc12g10670	Pc13g09930	B6H0S5	B6H4P3	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc13g09930 protein.	0.590
Pc12g10670	Pc16g13980	B6H0S5	B6H9U5	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc16g13980 protein.	0.729
Pc12g10670	Pc20g00110	B6H0S5	B6HER9	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc20g00110 protein; Belongs to the WD repeat SEC13 family.	0.688
Pc12g10670	Pc20g00740	B6H0S5	B6HGC5	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.969
Pc12g10670	Pc20g09200	B6H0S5	B6HF23	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc20g09200 protein.	0.768
Pc12g10670	Pc20g09900	B6H0S5	B6HFJ1	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc20g09900 protein.	0.737
Pc12g10670	Pc20g11730	B6H0S5	B6HGA7	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.881
Pc12g10670	Pc21g01440	B6H0S5	B6HID6	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc21g01440 protein.	0.427
Pc12g10670	Pc21g11790	B6H0S5	B6HKV0	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.427
Pc12g10670	Pc21g11800	B6H0S5	B6HKV1	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.427
Pc12g10670	Pc21g19270	B6H0S5	B6HJ39	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc21g19270 protein; Belongs to the AAA ATPase family.	0.656
Pc12g10670	Pc22g02800	B6H0S5	B6HNY5	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc22g02800 protein.	0.955
Pc12g10670	Pc22g15970	B6H0S5	B6HQP2	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc22g15970 protein.	0.798
Pc12g10670	Pc22g18540	B6H0S5	B6HUM6	Pc12g10670 protein; Belongs to the heat shock protein 70 family.	Pc22g18540 protein.	0.730
Pc13g03990	Pc13g05810	B6H255	B6H2Y2	Pc13g03990 protein.	Pc13g05810 protein.	0.840
Pc13g03990	Pc16g09020	B6H255	B6H843	Pc13g03990 protein.	Pc16g09020 protein.	0.505
Pc13g03990	Pc16g13980	B6H255	B6H9U5	Pc13g03990 protein.	Pc16g13980 protein.	0.599
Pc13g03990	Pc20g00740	B6H255	B6HGC5	Pc13g03990 protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.605
Pc13g03990	Pc20g09200	B6H255	B6HF23	Pc13g03990 protein.	Pc20g09200 protein.	0.631