(17 nodes) Ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway network (Penicillium rubens)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Pc12g15070	Pc12g15070 protein. (808 aa)
	Pc16g02340	Pc16g02340 protein. (211 aa)
	Pc13g06240	Pc13g06240 protein. (615 aa)
	Pc13g05910	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (261 aa)
	Pc13g15730	Pc13g15730 protein. (587 aa)
	Pc13g02590	Pc13g02590 protein. (222 aa)
	Pc16g02760	E3 ubiquitin-protein ligase. (833 aa)
	Pc24g03040	Pc24g03040 protein. (403 aa)
	Pc22g05430	Pc22g05430 protein. (186 aa)
	Pc22g09170	Pc22g09170 protein. (266 aa)
	Pc22g03950	Pc22g03950 protein; Belongs to the peptidase C19 family. (1284 aa)
	Pc21g03430	Pc21g03430 protein. (224 aa)
	Pc21g03150	Pc21g03150 protein. (232 aa)
	Pc21g23110	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (244 aa)
	Pc20g03710	Pc20g03710 protein. (546 aa)
	Pc18g01460	Pc18g01460 protein. (864 aa)
	Pc18g03360	Pc18g03360 protein. (651 aa)

Your Current Organism:

Penicillium rubens

NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Pc13g02590	Pc13g05910	B6H1L1	B6H379	Pc13g02590 protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.949
Pc13g02590	Pc13g06240	B6H1L1	B6H3E7	Pc13g02590 protein.	Pc13g06240 protein.	0.908
Pc13g02590	Pc13g15730	B6H1L1	B6H2Y6	Pc13g02590 protein.	Pc13g15730 protein.	0.850
Pc13g02590	Pc16g02340	B6H1L1	B6H7B7	Pc13g02590 protein.	Pc16g02340 protein.	0.991
Pc13g02590	Pc21g03150	B6H1L1	B6HKR3	Pc13g02590 protein.	Pc21g03150 protein.	0.996
Pc13g02590	Pc21g03430	B6H1L1	B6HL52	Pc13g02590 protein.	Pc21g03430 protein.	0.993
Pc13g02590	Pc21g23110	B6H1L1	B6HHW3	Pc13g02590 protein.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.848
Pc13g02590	Pc22g05430	B6H1L1	B6HUS8	Pc13g02590 protein.	Pc22g05430 protein.	0.908
Pc13g05910	Pc13g02590	B6H379	B6H1L1	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Pc13g02590 protein.	0.949
Pc13g05910	Pc13g06240	B6H379	B6H3E7	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Pc13g06240 protein.	0.999
Pc13g05910	Pc13g15730	B6H379	B6H2Y6	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Pc13g15730 protein.	0.876
Pc13g05910	Pc16g02340	B6H379	B6H7B7	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Pc16g02340 protein.	0.978
Pc13g05910	Pc21g03150	B6H379	B6HKR3	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Pc21g03150 protein.	0.864
Pc13g05910	Pc21g03430	B6H379	B6HL52	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Pc21g03430 protein.	0.891
Pc13g05910	Pc21g23110	B6H379	B6HHW3	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.927
Pc13g05910	Pc22g05430	B6H379	B6HUS8	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	Pc22g05430 protein.	0.999
Pc13g06240	Pc13g02590	B6H3E7	B6H1L1	Pc13g06240 protein.	Pc13g02590 protein.	0.908
Pc13g06240	Pc13g05910	B6H3E7	B6H379	Pc13g06240 protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.999
Pc13g06240	Pc13g15730	B6H3E7	B6H2Y6	Pc13g06240 protein.	Pc13g15730 protein.	0.959
Pc13g06240	Pc16g02340	B6H3E7	B6H7B7	Pc13g06240 protein.	Pc16g02340 protein.	0.975