119 items (Penicillium rubens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Pc22g15750	Pc22g15750 protein. (645 aa)
	Pc24g02810	Pc24g02810 protein. (165 aa)
	Pc24g02670	Pc24g02670 protein. (265 aa)
	Pc24g02640	Pc24g02640 protein. (529 aa)
	Pc24g02530	Pc24g02530 protein. (535 aa)
	Pc24g02460	ANK_REP_REGION domain-containing protein. (167 aa)
	Pc24g02440	Pc24g02440 protein. (217 aa)
	Pc24g02430	Pc24g02430 protein. (158 aa)
	Pc24g02340	Pc24g02340 protein. (181 aa)
	Pc24g02300	Pc24g02300 protein. (535 aa)
	Pc24g01860	Pc24g01860 protein. (524 aa)
	Pc24g01810	Pc24g01810 protein. (181 aa)
	Pc24g01800	Pc24g01800 protein. (195 aa)
	Pc24g01790	Uncharacterized protein. (606 aa)
	Pc24g01350	Pc24g01350 protein. (535 aa)
	Pc24g00340	Pc24g00340 protein. (535 aa)
	Pc24g01190	Pc24g01190 protein. (227 aa)
	Pc23g00590	Pc23g00590 protein. (373 aa)
	Pc23g00580	Pc23g00580 protein. (289 aa)
	Pc23g00530	Pc23g00530 protein. (292 aa)
	Pc23g00240	Pc23g00240 protein. (1013 aa)
	Pc23g00230	Pc23g00230 protein. (218 aa)
	Pc23g00220	Pc23g00220 protein. (180 aa)
	Pc23g00150	Pc23g00150 protein. (535 aa)
	Pc22g19550	Pc22g19550 protein. (1632 aa)
	Pc22g15310	Pc22g15310 protein. (305 aa)
	Pc22g06280	Pc22g06280 protein. (490 aa)
	Pc22g19310	Pc22g19310 protein. (1093 aa)
	Pc22g14330	Pc22g14330 protein. (231 aa)
	Pc22g26470	Pc22g26470 protein. (181 aa)
	Pc22g26460	Pc22g26460 protein. (219 aa)
	Pc22g18000	Pc22g18000 protein. (616 aa)
	Pc22g17980	Pc22g17980 protein. (411 aa)
	Pc22g25830	Pc22g25830 protein. (365 aa)
	Pc22g17420	Pc22g17420 protein. (429 aa)
	Pc22g24930	Pc22g24930 protein. (1982 aa)
	Pc22g15770	Pc22g15770 protein. (365 aa)
	Pc22g24050	Pc22g24050 protein. (639 aa)
	Pc22g01820	Pc22g01820 protein. (1770 aa)
	Pc21g00090	Pc21g00090 protein. (535 aa)
	Pc21g17800	Pc21g17800 protein. (384 aa)
	Pc21g21550	Pc21g21550 protein. (1357 aa)
	Pc21g21270	Pc21g21270 protein. (277 aa)
	Pc21g03870	Pc21g03870 protein. (2052 aa)
	Pc21g16610	Pc21g16610 protein. (549 aa)
	Pc21g11590	Pc21g11590 protein; Belongs to the OSBP family. (1245 aa)
	Pc21g02350	Pc21g02350 protein. (550 aa)
	Pc21g02340	Pc21g02340 protein. (566 aa)
	Pc21g10890	Pc21g10890 protein. (356 aa)
	Pc21g10810	Pc21g10810 protein. (226 aa)
	Pc21g06530	Pc21g06530 protein. (1130 aa)
	Pc21g06470	Pc21g06470 protein. (1189 aa)
	Pc21g23520	Pc21g23520 protein. (961 aa)
	Pc21g19090	Pc21g19090 protein. (1352 aa)
	Pc21g18910	Pc21g18910 protein. (1322 aa)
	Pc21g10020	Pc21g10020 protein. (605 aa)
	Pc21g22880	Pc21g22880 protein. (725 aa)
	Pc21g05530	Pc21g05530 protein. (587 aa)
	Pc20g13750	Pc20g13750 protein. (924 aa)
	Pc20g13640	Pc20g13640 protein. (492 aa)
	Pc20g13120	Uncharacterized protein. (580 aa)
	Pc20g06420	Pc20g06420 protein. (436 aa)
	Pc20g03560	Pc20g03560 protein. (1162 aa)
	Pc20g03470	Pc20g03470 protein. (1069 aa)
	Pc20g11330	Pc20g11330 protein. (653 aa)
	Pc20g11320	Pc20g11320 protein. (290 aa)
	Pc20g03230	Pc20g03230 protein. (1209 aa)
	Pc20g09510	Pc20g09510 protein. (834 aa)
	Pc20g00180	Pc20g00180 protein. (1053 aa)
	Pc19g00650	Pc19g00650 protein. (608 aa)
	Pc18g02340	Pc18g02340 protein. (1303 aa)
	Pc18g01550	Pc18g01550 protein. (839 aa)
	Pc18g04410	Pc18g04410 protein. (897 aa)
	Pc18g03920	Pc18g03920 protein. (489 aa)
	Pc17g01160	Pc17g01160 protein. (212 aa)
	Pc17g01140	Pc17g01140 protein. (453 aa)
	Pc17g00570	Pc17g00570 protein. (532 aa)
	Pc17g00200	Pc17g00200 protein. (529 aa)
	Pc16g13140	Pc16g13140 protein. (1125 aa)
	Pc16g15490	Pc16g15490 protein. (423 aa)
	Pc16g15440	Pc16g15440 protein. (800 aa)
	Pc16g15230	Pc16g15230 protein. (535 aa)
	Pc16g15080	Pc16g15080 protein. (189 aa)
	Pc16g04570	Pc16g04570 protein. (237 aa)
	Pc16g06120	Pc16g06120 protein. (1180 aa)
	Pc16g04540	Pc16g04540 protein. (284 aa)
	Pc16g09450	Pc16g09450 protein. (1328 aa)
	Pc16g06020	Pc16g06020 protein. (1307 aa)
	Pc16g10620	Pc16g10620 protein. (876 aa)
	Pc16g10470	Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12. (425 aa)
	Pc16g07040	Pc16g07040 protein. (1085 aa)
	Pc16g07030	Pc16g07030 protein. (682 aa)
	Pc16g07020	Pc16g07020 protein. (471 aa)
	Pc16g03680	Pc16g03680 protein. (1096 aa)
	Pc16g07790	Pc16g07790 protein. (749 aa)
	Pc16g07290	Pc16g07290 protein. (75 aa)
	Pc16g06520	Pc16g06520 protein. (218 aa)
	Pc14g02210	Pc14g02210 protein. (464 aa)
	Pc14g01590	Pc14g01590 protein. (382 aa)
	Pc14g01530	Pc14g01530 protein. (449 aa)
	Pc14g01520	Pc14g01520 protein. (581 aa)
	Pc13g13130	Pc13g13130 protein. (1402 aa)
	Pc13g15400	Pc13g15400 protein. (765 aa)
	Pc13g05270	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (731 aa)
	Pc13g01310	Pc13g01310 protein. (489 aa)
	Pc13g02960	Pc13g02960 protein. (172 aa)
	Pc13g02630	Pc13g02630 protein. (285 aa)
	Pc13g00460	Pc13g00460 protein. (284 aa)
	Pc12g10880	Pc12g10880 protein. (1582 aa)
	Pc12g06750	Pc12g06750 protein. (857 aa)
	Pc12g06560	Pc12g06560 protein. (348 aa)
	Pc12g10140	Pc12g10140 protein. (2338 aa)
	Pc12g09710	Pc12g09710 protein. (618 aa)
	Pc12g01670	Pc12g01670 protein. (259 aa)
	Pc12g08520	Pc12g08520 protein. (417 aa)
	Pc12g08080	Pc12g08080 protein. (1735 aa)
	Pc12g14850	Pc12g14850 protein. (678 aa)
	Pc06g02120	Pc06g02120 protein. (477 aa)
	Pc06g00880	Pc06g00880 protein. (1048 aa)

Your Current Organism:

Penicillium rubens

NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Pc12g01670	Pc13g00460	B6GZ40	B6H174	Pc12g01670 protein.	Pc13g00460 protein.	0.515
Pc12g01670	Pc13g01310	B6GZ40	B6H1P6	Pc12g01670 protein.	Pc13g01310 protein.	0.526
Pc12g01670	Pc14g01530	B6GZ40	B6H5Y1	Pc12g01670 protein.	Pc14g01530 protein.	0.527
Pc12g01670	Pc14g02210	B6GZ40	B6H648	Pc12g01670 protein.	Pc14g02210 protein.	0.518
Pc12g01670	Pc16g04570	B6GZ40	B6H904	Pc12g01670 protein.	Pc16g04570 protein.	0.452
Pc12g01670	Pc16g09450	B6GZ40	B6H8P5	Pc12g01670 protein.	Pc16g09450 protein.	0.451
Pc12g01670	Pc16g15230	B6GZ40	B6HA66	Pc12g01670 protein.	Pc16g15230 protein.	0.530
Pc12g01670	Pc16g15490	B6GZ40	B6HA91	Pc12g01670 protein.	Pc16g15490 protein.	0.529
Pc12g01670	Pc17g00570	B6GZ40	B6HAY4	Pc12g01670 protein.	Pc17g00570 protein.	0.527
Pc12g01670	Pc17g01140	B6GZ40	B6HB33	Pc12g01670 protein.	Pc17g01140 protein.	0.528
Pc12g01670	Pc18g04410	B6GZ40	B6HBK9	Pc12g01670 protein.	Pc18g04410 protein.	0.413
Pc12g01670	Pc20g06420	B6GZ40	B6HGH4	Pc12g01670 protein.	Pc20g06420 protein.	0.513
Pc12g01670	Pc20g11320	B6GZ40	B6HG69	Pc12g01670 protein.	Pc20g11320 protein.	0.437
Pc12g01670	Pc20g13640	B6GZ40	B6HH01	Pc12g01670 protein.	Pc20g13640 protein.	0.526
Pc12g01670	Pc20g13750	B6GZ40	B6HH12	Pc12g01670 protein.	Pc20g13750 protein.	0.492
Pc12g01670	Pc21g00090	B6GZ40	B6HN20	Pc12g01670 protein.	Pc21g00090 protein.	0.527
Pc12g01670	Pc21g06530	B6GZ40	B6HJB8	Pc12g01670 protein.	Pc21g06530 protein.	0.439
Pc12g01670	Pc21g10020	B6GZ40	B6HI20	Pc12g01670 protein.	Pc21g10020 protein.	0.531
Pc12g01670	Pc21g10810	B6GZ40	B6HJE4	Pc12g01670 protein.	Pc21g10810 protein.	0.474
Pc12g01670	Pc21g10890	B6GZ40	B6HJF2	Pc12g01670 protein.	Pc21g10890 protein.	0.531