134 items (Penicillium rubens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Pc12g10820	Pc12g10820 protein. (1617 aa)
	Pc12g03400	Pc12g03400 protein. (510 aa)
	Pc12g14320	Pc12g14320 protein. (336 aa)
	Pc12g10510	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (123 aa)
	Pc12g06730	Pc12g06730 protein. (214 aa)
	Pc12g06410	Pc12g06410 protein. (1504 aa)
	Pc12g05910	Pc12g05910 protein. (332 aa)
	Pc12g01620	Pc12g01620 protein. (889 aa)
	Pc12g04780	Pc12g04780 protein. (366 aa)
	Pc12g15920	Pc12g15920 protein. (608 aa)
	Pc12g12160	Pc12g12160 protein. (1208 aa)
	Pc12g08440	Pc12g08440 protein. (564 aa)
	Pc12g08430	Pc12g08430 protein. (249 aa)
	Pc12g08410	Pc12g08410 protein. (284 aa)
	Pc12g07450	Pc12g07450 protein. (152 aa)
	Pc12g14830	Pc12g14830 protein. (383 aa)
	Pc06g01290	Pc06g01290 protein. (140 aa)
	Pc22g19720	Pc22g19720 protein. (757 aa)
	Pc22g11050	Pc22g11050 protein. (580 aa)
	Pc22g03000	Pc22g03000 protein. (487 aa)
	Pc22g01070	Pc22g01070 protein. (1209 aa)
	Pc22g02480	Pc22g02480 protein. (302 aa)
	Pc21g18180	Pc21g18180 protein. (597 aa)
	Pc21g08660	Small nuclear ribonucleoprotein Sm D2. (123 aa)
	Pc21g08620	Pc21g08620 protein. (483 aa)
	Pc21g17270	Pc21g17270 protein. (745 aa)
	Pc21g17140	Pc21g17140 protein. (217 aa)
	Pc21g12690	Pc21g12690 protein. (260 aa)
	Pc21g12660	Pc21g12660 protein. (582 aa)
	Pc21g04110	Pc21g04110 protein. (571 aa)
	Pc21g20940	Pc21g20940 protein. (213 aa)
	Pc21g16450	Pc21g16450 protein. (579 aa)
	Pc21g03370	Pc21g03370 protein. (394 aa)
	Pc21g20540	Pc21g20540 protein. (369 aa)
	Pc21g16370	Pc21g16370 protein. (487 aa)
	Pc21g11960	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (444 aa)
	Pc21g11820	Pc21g11820 protein. (370 aa)
	Pc21g03110	Pc21g03110 protein. (1624 aa)
	Pc21g03000	Pc21g03000 protein. (171 aa)
	Pc21g02990	Pc21g02990 protein. (88 aa)
	Pc21g02980	Pc21g02980 protein. (159 aa)
	Pc21g16120	Pc21g16120 protein. (525 aa)
	Pc21g20180	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)
	Pc21g07040	Pc21g07040 protein. (249 aa)
	Pc21g11050	Pc21g11050 protein. (247 aa)
	Pc21g06700	Pc21g06700 protein. (756 aa)
	Pc21g19500	Pc21g19500 protein. (108 aa)
	Pc21g19490	Pc21g19490 protein. (387 aa)
	Pc21g15360	Pc21g15360 protein. (282 aa)
	Pc21g15190	Pc21g15190 protein. (503 aa)
	Pc21g23780	Pc21g23780 protein. (659 aa)
	Pc21g23620	Pc21g23620 protein. (270 aa)
	Pc16g02540	Pc16g02540 protein. (200 aa)
	Pc16g02360	Pc16g02360 protein. (672 aa)
	Pc16g08360	Pc16g08360 protein. (1262 aa)
	Pc16g08210	Pc16g08210 protein. (925 aa)
	Pc16g05440	Pc16g05440 protein. (1162 aa)
	Pc16g08860	Pc16g08860 protein. (605 aa)
	Pc16g04580	Pc16g04580 protein. (452 aa)
	Pc16g04930	Pc16g04930 protein. (519 aa)
	Pc16g04940	Pc16g04940 protein. (671 aa)
	Pc16g10890	Pc16g10890 protein. (809 aa)
	Pc16g12340	Pc16g12340 protein. (585 aa)
	Pc16g12600	Pc16g12600 protein. (214 aa)
	Pc18g03460	Pc18g03460 protein; Belongs to the DEAD box helicase family. (790 aa)
	Pc18g04100	Pc18g04100 protein. (2354 aa)
	Pc18g04140	Pc18g04140 protein. (554 aa)
	Pc18g04570	Pc18g04570 protein. (873 aa)
	Pc18g00800	Pc18g00800 protein. (585 aa)
	Pc18g05750	Pc18g05750 protein. (583 aa)
	Pc18g01760	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	Pc18g02030	Splicing factor subunit; Belongs to the SF3B5 family. (83 aa)
	Pc20g01340	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (100 aa)
	Pc20g01380	Pc20g01380 protein. (177 aa)
	Pc20g15290	Pc20g15290 protein. (286 aa)
	Pc20g07660	Pc20g07660 protein. (519 aa)
	Pc20g02970	Pc20g02970 protein. (470 aa)
	Pc20g09280	Pc20g09280 protein. (521 aa)
	Pc20g09410	Pc20g09410 protein. (2205 aa)
	Pc20g10130	Pc20g10130 protein. (95 aa)
	Pc20g10470	Pc20g10470 protein. (432 aa)
	Pc20g10480	Small nuclear ribonucleoprotein G. (88 aa)
	Pc20g00660	Pc20g00660 protein. (148 aa)
	Pc20g11300	Pc20g11300 protein. (564 aa)
	Pc20g03510	Pc20g03510 protein. (151 aa)
	Pc20g12320	Pc20g12320 protein. (213 aa)
	Pc20g12680	Pc20g12680 protein. (236 aa)
	Pc20g06520	Pc20g06520 protein. (465 aa)
	Pc21g14480	Pc21g14480 protein. (543 aa)
	Pc21g10420	Pc21g10420 protein. (1231 aa)
	Pc21g14670	Pc21g14670 protein. (222 aa)
	Pc21g23610	Pc21g23610 protein. (366 aa)
	Pc22g11830	Pc22g11830 protein. (297 aa)
	Pc24g00240	Pc24g00240 protein. (47 aa)
	Pc22g16450	Pc22g16450 protein. (279 aa)
	Pc22g20510	Pc22g20510 protein. (429 aa)
	Pc22g03450	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (185 aa)
	Pc22g08050	Pc22g08050 protein. (937 aa)
	Pc22g12590	Small nuclear ribonucleoprotein Sm D3. (117 aa)
	Pc22g25400	Pc22g25400 protein. (856 aa)
	Pc22g08360	Pc22g08360 protein. (113 aa)
	Pc22g08680	Pc22g08680 protein. (790 aa)
	Pc22g13140	Pc22g13140 protein. (670 aa)
	Pc22g21770	Pc22g21770 protein. (1018 aa)
	Pc22g04670	Pc22g04670 protein. (774 aa)
	Pc22g17910	Pc22g17910 protein. (521 aa)
	Pc22g22070	Pc22g22070 protein. (1340 aa)
	Pc22g04920	Pc22g04920 protein. (700 aa)
	Pc22g04950	Pc22g04950 protein. (296 aa)
	Pc22g04980	Pc22g04980 protein. (234 aa)
	Pc22g22450	Pc22g22450 protein. (627 aa)
	Pc22g10150	Pc22g10150 protein. (983 aa)
	Pc22g10250	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (173 aa)
	Pc22g14730	Pc22g14730 protein. (586 aa)
	Pc22g18900	Pc22g18900 protein. (609 aa)
	Pc22g23430	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	Pc14g01320	Pc14g01320 protein. (188 aa)
	Pc13g13990	Pc13g13990 protein. (194 aa)
	Pc13g13600	Pc13g13600 protein. (720 aa)
	Pc13g11900	Pc13g11900 protein. (132 aa)
	Pc13g10360	Pc13g10360 protein. (825 aa)
	Pc13g09920	Pc13g09920 protein. (315 aa)
	Pc13g10700	Pc13g10700 protein. (301 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	Pc13g10450	Pc13g10450 protein. (781 aa)
	Pc13g07180	Pc13g07180 protein. (212 aa)
	Pc13g13480	Pc13g13480 protein. (405 aa)
	Pc13g05610	Pc13g05610 protein. (288 aa)
	Pc13g15300	Pc13g15300 protein. (1092 aa)
	Pc13g14550	Pc13g14550 protein. (71 aa)
	Pc13g05230	Pc13g05230 protein. (1124 aa)
	Pc13g03880	Pc13g03880 protein. (448 aa)
	Pc13g03680	Pc13g03680 protein. (242 aa)
	Pc13g02550	Pc13g02550 protein. (216 aa)

Your Current Organism:

Penicillium rubens

NCBI taxonomy Id: 500485
Other names: P. rubens Wisconsin 54-1255, Penicillium rubens Wisconsin 54-1255

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM8	Pc12g04780	B6H3Y0	B6GYJ0	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc12g04780 protein.	0.852
LSM8	Pc12g06410	B6H3Y0	B6H0D7	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc12g06410 protein.	0.722
LSM8	Pc12g10510	B6H3Y0	B6H0Q9	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.980
LSM8	Pc12g10820	B6H3Y0	B6H104	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc12g10820 protein.	0.722
LSM8	Pc12g12160	B6H3Y0	B6GYC1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc12g12160 protein.	0.858
LSM8	Pc12g14320	B6H3Y0	B6H0U1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc12g14320 protein.	0.624
LSM8	Pc12g14830	B6H3Y0	B6GWX2	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc12g14830 protein.	0.473
LSM8	Pc13g03680	B6H3Y0	B6H1Y1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc13g03680 protein.	0.450
LSM8	Pc13g07180	B6H3Y0	B6H3R7	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc13g07180 protein.	0.906
LSM8	Pc13g09920	B6H3Y0	B6H4P2	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc13g09920 protein.	0.856
LSM8	Pc13g10360	B6H3Y0	B6H4T6	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc13g10360 protein.	0.557
LSM8	Pc13g14550	B6H3Y0	B6H2H8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc13g14550 protein.	0.720
LSM8	Pc14g01320	B6H3Y0	B6H5W0	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc14g01320 protein.	0.824
LSM8	Pc16g02540	B6H3Y0	B6H740	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc16g02540 protein.	0.656
LSM8	Pc16g04580	B6H3Y0	B6H8Y8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc16g04580 protein.	0.450
LSM8	Pc16g04930	B6H3Y0	B6H9A3	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc16g04930 protein.	0.996
LSM8	Pc16g08360	B6H3Y0	B6H836	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc16g08360 protein.	0.760
LSM8	Pc16g08860	B6H3Y0	B6H8C1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc16g08860 protein.	0.722
LSM8	Pc16g12340	B6H3Y0	B6HAC5	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc16g12340 protein.	0.995
LSM8	Pc16g12600	B6H3Y0	B6HAF1	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	Pc16g12600 protein.	0.914