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DmsA_5 DmsA_5 dmsC dmsC DmsB_1 DmsB_1 HybB HybB FdnH_2 FdnH_2 hybO hybO glpC glpC frdA frdA frdC frdC HyfE HyfE HyfC HyfC napC napC napB napB nrfA nrfA nrfB nrfB DmsC_2 DmsC_2 DmsB_2 DmsB_2 DmsA_3 DmsA_3 DmsA_4 DmsA_4 dmsB dmsB dmsC-2 dmsC-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DmsA_5Molybdopterin dinucleotide binding domain protein; KEGG: yps:YPTB2688 3.2e-87 dmsA; putative dimethyl sulfoxide reductase chain A protein K00397. (240 aa)
dmsCDMSO reductase, anchor subunit DmsC; KEGG: eci:UTI89_C0969 2.5e-80 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308; Psort location: CytoplasmicMembrane, score: 10.00. (285 aa)
DmsB_1KEGG: ecp:ECP_0909 2.8e-33 anaerobic dimethyl sulfoxide reductase, subunit B K07307; Psort location: Cytoplasmic, score: 8.96. (83 aa)
HybBKEGG: eci:UTI89_C3417 7.6e-166 hybB; probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit K00178; Psort location: CytoplasmicMembrane, score: 10.00. (395 aa)
FdnH_2Tat pathway signal sequence domain protein; KEGG: eci:UTI89_C3418 1.8e-141 hybA; hydrogenase-2 operon protein HybA precursor K00396; Psort location: Periplasmic, score: 10.00. (349 aa)
hybOHydrogenase-2 small chain; KEGG: sbo:SBO_2866 9.9e-180 putative hydrogenase subunit K06282; Psort location: Periplasmic, score: 9.44. (372 aa)
glpCKEGG: ype:YPO3824 3.3e-181 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113; Psort location: Cytoplasmic, score: 8.96. (398 aa)
frdAKEGG: eca:ECA3969 1.7e-296 frdA; fumarate reductase flavoprotein subunit K00244; Psort location: Periplasmic, score: 9.44. (598 aa)
frdCFumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. (131 aa)
HyfENADH-ubiquinone/plastoquinone oxidoreductase chain 4L; KEGG: eca:ECA1243 1.0e-83 hyfE; hydrogenase-4 component E; Psort location: CytoplasmicMembrane, score: 10.00. (216 aa)
HyfCNADH dehydrogenase; KEGG: eca:ECA1245 7.6e-134 hyfC; hydrogenase-4 component C; Psort location: CytoplasmicMembrane, score: 10.00. (316 aa)
napCKEGG: eci:UTI89_C2480 2.9e-102 napC; cytochrome c protein, subunit of nitrate reductase, periplasmic K02569; Psort location: CytoplasmicMembrane, score: 8.02. (200 aa)
napBPeriplasmic nitrate reductase, diheme cytochrome c subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. (149 aa)
nrfAFormate-dependent cytochrome c nitrite reductase, c552 subunit; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (477 aa)
nrfBKEGG: pmu:PM0023 0.0044 nrfA; nitrite reductase periplasmic cytochrome c552 K03385. (190 aa)
DmsC_2Hypothetical protein; KEGG: dsy:DSY0599 1.1e-22 dmsC; putative anaerobic DMSO reductase chain C anchor subunit K00369; Psort location: CytoplasmicMembrane, score: 10.00. (272 aa)
DmsB_2KEGG: dsy:DSY2331 8.3e-41 dmsB; putative anaerobic DMSO reductase chain B iron-sulfur subunit K00369. (161 aa)
DmsA_3Molybdopterin oxidoreductase; KEGG: dsy:DSY2332 3.6e-214 dmsA; putative anaerobic DMSO reductase chain A precursor K00369; Psort location: Periplasmic, score: 9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (782 aa)
DmsA_4Anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; KEGG: yps:YPTB2688 1.9e-208 dmsA; putative dimethyl sulfoxide reductase chain A protein K00397; Psort location: Periplasmic, score: 9.44. (529 aa)
dmsBDimethylsulfoxide reductase, chain B; KEGG: spt:SPA4124 1.5e-80 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K00397. (205 aa)
dmsC-2DMSO reductase, anchor subunit DmsC; KEGG: ypm:YP_2592 1.5e-75 dmsC2; anaerobic dimethyl sulfoxide reductase subunit B K00397; Psort location: CytoplasmicMembrane, score: 10.00. (258 aa)
Your Current Organism:
Providencia rustigianii
NCBI taxonomy Id: 500637
Other names: P. rustigianii DSM 4541, Providencia rustigianii DSM 4541, Providencia rustigianii str. DSM 4541, Providencia rustigianii strain DSM 4541
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