STRINGSTRING
IaaA IaaA lipB lipB lipA lipA EFB73803.1 EFB73803.1 lplA lplA yhgI yhgI Skp Skp hypE hypE hypD hypD hypC hypC hypA hypA hybE hybE hybD hybD YdaF YdaF panZ panZ hypA-2 hypA-2 hypC-2 hypC-2 lepB lepB EFB72065.1 EFB72065.1 EFB71386.1 EFB71386.1 ChuR ChuR rimI rimI EFB70885.1 EFB70885.1 fdhE fdhE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IaaAAsparaginase; KEGG: nmu:Nmul_A2166 1.8e-100 peptidase T2, asparaginase 2 K01424; Psort location: Periplasmic, score: 9.44. (366 aa)
lipBLipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (214 aa)
lipALipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (321 aa)
EFB73803.1Acetyltransferase, GNAT family; KEGG: plu:plu2090 2.6e-78 rimJ; ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S5) K03790; Psort location: Cytoplasmic, score: 8.96. (195 aa)
lplALipoyltransferase and lipoate-protein ligase; Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes. Belongs to the LplA family. (338 aa)
yhgIIscR-regulated protein YhgI; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. (192 aa)
SkpOuter membrane protein; KEGG: pab:PAB1179 0.00014 V-type H+-transporting ATPase subunit E K02121; Psort location: OuterMembrane, score: 9.92; Belongs to the skp family. (164 aa)
hypEKEGG: rru:Rru_A0305 3.1e-82 hydrogenase expression/formation protein HypE K04655. (341 aa)
hypDHydrogenase expression/formation protein HypD; Psort location: Cytoplasmic, score: 8.96; Belongs to the HypD family. (370 aa)
hypCHydrogenase assembly chaperone HypC/HupF; Psort location: Cytoplasmic, score: 8.96. (98 aa)
hypAHydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa)
hybEHydrogenase-2 assembly chaperone HybE; Psort location: Cytoplasmic, score: 8.96. (166 aa)
hybDHydrogenase expression/formation protein; KEGG: sfx:S3241 5.1e-57 hybD; hydrogenase-2 component K08567; Psort location: Cytoplasmic, score: 8.96. (164 aa)
YdaFHypothetical protein; KEGG: bcz:BCZK2820 7.1e-28 acetyltransferase, GNAT family K00680; Psort location: Cytoplasmic, score: 8.96. (200 aa)
panZHypothetical protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family. (136 aa)
hypA-2Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa)
hypC-2Hydrogenase assembly chaperone HypC/HupF; Psort location: Cytoplasmic, score: 8.96. (90 aa)
lepBSignal peptidase I; KEGG: plu:plu3341 3.1e-114 lepB; signal peptidase I (SPase I) (leader peptidase I) K03100; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family. (321 aa)
EFB72065.1Sel1 repeat protein; KEGG: cch:Cag_1938 3.4e-44 Sel1-like repeat; Psort location: Extracellular, score: 9.71. (239 aa)
EFB71386.1KEGG: reh:H16_A0240 1.9e-09 acetyltransferase (GNAT) family K00680; Psort location: Cytoplasmic, score: 8.96. (171 aa)
ChuRAnaerobic sulfatase maturase; KEGG: syg:sync_2368 1.4e-10 arylsulfatase regulator. (411 aa)
rimIKEGG: plu:plu4250 2.2e-47 rimI; ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S18) K03789; Psort location: Cytoplasmic, score: 9.26. (156 aa)
EFB70885.1Asparaginase; KEGG: nmu:Nmul_A2166 9.1e-83 peptidase T2, asparaginase 2 K01424; Psort location: Periplasmic, score: 9.44. (353 aa)
fdhEFormate dehydrogenase accessory protein FdhE; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. (339 aa)
Your Current Organism:
Providencia rustigianii
NCBI taxonomy Id: 500637
Other names: P. rustigianii DSM 4541, Providencia rustigianii DSM 4541, Providencia rustigianii str. DSM 4541, Providencia rustigianii strain DSM 4541
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.