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| | sucB | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (401 aa) |
| | EFB70452.1 | Relaxase/mobilization nuclease domain protein; KEGG: rde:RD1_A0112 0.0057 virD2; VirD2 protein. (387 aa) |
| | rpoA | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (329 aa) |
| | hslU | ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (444 aa) |
| | hslV | ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (176 aa) |
| | gpsA | KEGG: plu:plu4838 1.7e-145 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (342 aa) |
| | coaBC | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (423 aa) |
| | FdoI | KEGG: plu:plu4889 5.5e-92 fdoI; formate dehydrogenase, cytochrome B556(FDO) subunit (formate dehydrogenase-O gamma subunit) (FDH-Z gamma subunit) (aerobic formate dehydrogenase cytochrome B556 subunit) K00127; Psort location: CytoplasmicMembrane, score: 10.00. (218 aa) |
| | rnpA | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (119 aa) |
| | dnaN | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (366 aa) |
| | HolD | Putative DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. (136 aa) |
| | carA | KEGG: eci:UTI89_C0036 2.1e-177 carA; carbamoyl-phosphate synthase small chain K01956; Psort location: Cytoplasmic, score: 8.96; Belongs to the CarA family. (396 aa) |
| | ribH | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. (157 aa) |
| | xseB | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (83 aa) |
| | clpX | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (425 aa) |
| | trmB | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (238 aa) |
| | EFB71093.1 | KEGG: reh:H16_A0476 3.5e-65 predicted glutamine amidotransferase class II. (255 aa) |
| | accD | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (323 aa) |
| | nuoD | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. (600 aa) |
| | NuoE | KEGG: plu:plu3086 1.4e-70 nuoE; NADH dehydrogenase I chain E (NADH-ubiquinone oxidoreductase chain 5) (NUO5) K00334; Psort location: Cytoplasmic, score: 9.97. (179 aa) |
| | nuoF | NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (453 aa) |
| | NrdB | KEGG: plu:plu3053 2.0e-188 nrdB; ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide reductase 1) (B2 protein) (R2 protein) K00526; Psort location: Cytoplasmic, score: 8.96. (380 aa) |
| | NrdA | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (763 aa) |
| | dmsB | Dimethylsulfoxide reductase, chain B; KEGG: spt:SPA4124 1.5e-80 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K00397. (205 aa) |
| | DmsB_2 | KEGG: dsy:DSY2331 8.3e-41 dmsB; putative anaerobic DMSO reductase chain B iron-sulfur subunit K00369. (161 aa) |
| | holB | DNA polymerase III, delta' subunit; KEGG: plu:plu2827 8.5e-103 holB; DNA-directed DNA polymerase III delta' chain K02341. (330 aa) |
| | Ndh | Pyridine nucleotide-disulfide oxidoreductase; KEGG: plu:plu2821 7.9e-187 ndh; NADH dehydrogenase K03885. (434 aa) |
| | ppk1 | Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (689 aa) |
| | xseA | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (455 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (488 aa) |
| | holE | KEGG: eca:ECA2475 2.4e-27 holE; DNA polymerase III, theta subunit K02345. (76 aa) |
| | cysD | KEGG: plu:plu0709 1.4e-148 cysD; sulfate adenylyltransferase subunit 2 (sulfate adenylate transferase) (SAT) (ATP-sulfurylase small subunit) K00957; Psort location: Cytoplasmic, score: 8.96. (317 aa) |
| | cysN | Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (480 aa) |
| | cysC | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. (207 aa) |
| | EfeU | FTR1 family protein; Psort location: CytoplasmicMembrane, score: 10.00. (285 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (433 aa) |
| | dnaX | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (648 aa) |
| | leuD | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (200 aa) |
| | leuC | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (467 aa) |
| | aceE | Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (888 aa) |
| | aceF | Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (620 aa) |
| | gcvH | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (130 aa) |
| | gcvP | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (968 aa) |
| | EFB72060.1 | KEGG: vch:VC1769 0. DNA methylase HsdM, putative K03427; Psort location: Cytoplasmic, score: 8.96. (821 aa) |
| | EFB72059.1 | Hypothetical protein; KEGG: xac:XAC2899 2.3e-61 type I restriction-modification system specificity determinant K01154. (435 aa) |
| | EFB72050.1 | Hypothetical protein. (511 aa) |
| | EFB72009.1 | Siphovirus Gp157; Psort location: Cytoplasmic, score: 8.96. (166 aa) |
| | hscB | Fe-S protein assembly co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. (173 aa) |
| | IlvM | Hypothetical protein; KEGG: plu:plu4684 5.7e-26 ilvM; acetolactate synthase isozyme II small subunit (AHAS-II) (acetohydroxy-acid synthase II small subunit) (ALS-II) K01653; Psort location: Cytoplasmic, score: 8.96. (89 aa) |
| | pyrI | Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase. (154 aa) |
| | HolC | KEGG: plu:plu4482 1.1e-68 holC; DNA polymerase III, chi subunit K02339. (168 aa) |
| | HyfG | Respiratory-chain NADH dehydrogenase, 30 Kd subunit; KEGG: eca:ECA1241 2.3e-267 hyfG; hydrogenase-4 component G; Psort location: Periplasmic, score: 9.44. (577 aa) |
| | HycG | NADH ubiquinone oxidoreductase, 20 Kd subunit; KEGG: eca:ECA1239 2.4e-107 hyfI; hydrogenase-4 component I. (260 aa) |
| | hypA-2 | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa) |
| | FdhF_2 | Formate dehydrogenase, alpha subunit; KEGG: ecc:c5625 7.7e-228 fdhF; formate dehydrogenase H K00123; Psort location: Periplasmic, score: 9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (559 aa) |
| | EFB72300.1 | Molybdopterin oxidoreductase Fe4S4 domain protein; KEGG: aha:AHA_2495 1.3e-60 fdhA; formate dehydrogenase, alpha subunit, selenocysteine-containing K00122. (141 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (440 aa) |
| | glpA | KEGG: ype:YPO3826 1.4e-244 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111; Psort location: Cytoplasmic, score: 9.97; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (551 aa) |
| | KynA | KEGG: plu:plu1434 1.1e-59 hypothetical protein K00453. (231 aa) |
| | EFB72610.1 | ATP-grasp domain protein; KEGG: mlo:mll9226 1.9e-33 argininosuccinate lyase K01755. (406 aa) |
| | accC | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (448 aa) |
| | accB | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (156 aa) |
| | rpoN | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (481 aa) |
| | GltD | Pyridine nucleotide-disulfide oxidoreductase; KEGG: plu:plu4010 1.5e-153 gltD; glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT) (GLTS beta chain) K00266; Psort location: Cytoplasmic, score: 9.97. (458 aa) |
| | hypF | Carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (759 aa) |
| | hybO | Hydrogenase-2 small chain; KEGG: sbo:SBO_2866 9.9e-180 putative hydrogenase subunit K06282; Psort location: Periplasmic, score: 9.44. (372 aa) |
| | hypA | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa) |
| | hypE | KEGG: rru:Rru_A0305 3.1e-82 hydrogenase expression/formation protein HypE K04655. (341 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (581 aa) |
| | PolB | Putative DNA polymerase II; KEGG: yps:YPTB0659 5.0e-288 polB, dinA; DNA polymerase II and and 3'--> 5' exonuclease K02336. (783 aa) |
| | recC | Exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1124 aa) |
| | recB | Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1201 aa) |
| | recD | Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (625 aa) |
| | accA-2 | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa) |
| | dmsA | KEGG: ecj:JW5118 0. dmsA; dimethyl sulfoxide reductase, anaerobic, subunit A K07306; Psort location: Periplasmic, score: 9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (814 aa) |
| | DmsB_1 | KEGG: ecp:ECP_0909 2.8e-33 anaerobic dimethyl sulfoxide reductase, subunit B K07307; Psort location: Cytoplasmic, score: 8.96. (83 aa) |
| | IaaH | Amidohydrolase; KEGG: hso:HS_1243 3.6e-127 possible peptidase, M20/M25/M40 family K01463; Psort location: Cytoplasmic, score: 8.96. (421 aa) |
| | FdrA | Bacterial FdrA protein; KEGG: ape:APE_1072.1 9.6e-16 succinyl-CoA synthetase alpha chain K01902. (516 aa) |
| | EchA8_1 | Putative enoyl-CoA hydratase PaaB; KEGG: ecj:JW1389 8.1e-98 paaG; acyl-CoA hydratase K01692. (269 aa) |
| | EchA8_2 | enoyl-CoA hydratase/isomerase family protein; KEGG: ecj:JW1388 9.5e-72 paaF; enoyl-CoA hydratase-isomerase K01692. (260 aa) |
| | paaK | phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: reh:H16_B1359 8.5e-87 paaE2; phenylacetic acid degradation protein E,flavodoxin reductase; Psort location: Cytoplasmic, score: 8.96. (362 aa) |
| | paaI | phenylacetate-CoA oxygenase, PaaI subunit; Psort location: Cytoplasmic, score: 8.96. (262 aa) |
| | paaH | phenylacetate-CoA oxygenase, PaaH subunit. (95 aa) |
| | paaG | phenylacetate-CoA oxygenase, PaaG subunit; KEGG: reh:H16_A3520 8.4e-112 paaA1; phenylacetic acid degradation protein A K00455; Psort location: Cytoplasmic, score: 8.96. (312 aa) |
| | GlpD_1 | FAD dependent oxidoreductase; KEGG: plu:plu0194 3.8e-235 glpD; aerobic glycerol-3-phosphate dehydrogenase GlpD K00111; Psort location: Cytoplasmic, score: 9.97; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (500 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (694 aa) |
| | rpoZ | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (91 aa) |
| | rpoB | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1350 aa) |
| | rpoC | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1407 aa) |
| | thiH | Thiazole biosynthesis protein ThiH; KEGG: tte:TTE1073 1.1e-10 bioB; Biotin synthase and related enzymes K01012. (373 aa) |
| | thiS | Thiamine biosynthesis protein ThiS. (66 aa) |
| | FdnI | Formate dehydrogenase, gamma subunit; KEGG: ecj:JW1472 2.3e-100 fdnI; formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible K08350; Psort location: CytoplasmicMembrane, score: 10.00. (219 aa) |
| | PsrA | Molybdopterin dinucleotide binding domain protein; KEGG: afu:AF0159 2.6e-95 molybdopterin oxidoreductase, molybdopterin binding subunit K00183; Psort location: Cytoplasmic, score: 8.96; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1027 aa) |
| | citF | Citrate lyase, alpha subunit; KEGG: stm:STM0621 1.0e-209 citF; bifunctional citrate lyase alpha chain/citrate-ACP transferase K01037:K01643; Psort location: Cytoplasmic, score: 9.97. (513 aa) |
| | citE | KEGG: ssn:SSO_0568 1.1e-130 citE; citrate lyase beta chain; acyl lyase subunit K01660:K01644; Psort location: Cytoplasmic, score: 9.97; Belongs to the HpcH/HpaI aldolase family. (298 aa) |
| | uvrC | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (610 aa) |
| | YxeP | Amidohydrolase; KEGG: lwe:lwe0499 5.3e-142 N-acyl-L-amino acid amidohydrolase, putative K01463. (394 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (181 aa) |
| | ruvA | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (205 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (336 aa) |
| | EFB73701.1 | Hypothetical protein. (886 aa) |
| | accA | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa) |
| | trpD | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (340 aa) |
| | NrdF2 | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (323 aa) |
| | NrdE | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (710 aa) |
| | holA | KEGG: eca:ECA1307 6.3e-130 holA; DNA polymerase III, delta subunit K02340. (344 aa) |
| | sdhC | KEGG: spt:SPA2011 1.7e-49 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. (129 aa) |
| | sucA | KEGG: plu:plu1430 0. sucA; 2-oxoglutarate dehydrogenase E1 component (alpha-ketoglutarate dehydrogenase) K00164; Psort location: Cytoplasmic, score: 9.26. (935 aa) |
| | sucD | succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa) |
| | uvrB | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (672 aa) |
| | moaD | Molybdopterin converting factor, subunit 1. (81 aa) |
| | EFB74021.1 | KEGG: sac:SACOL0346 1.9e-11 prophage L54a, N-6-adenine-methyltransferase K00571. (214 aa) |
