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| | EFB70452.1 | Relaxase/mobilization nuclease domain protein; KEGG: rde:RD1_A0112 0.0057 virD2; VirD2 protein. (387 aa) |
| | ThiF | ThiF family protein; KEGG: eca:ECA0230 2.8e-88 thiF; thiamine biosynthesis adenylyltransferase K03148. (252 aa) |
| | thiS | Thiamine biosynthesis protein ThiS. (66 aa) |
| | thiG | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. (256 aa) |
| | thiH | Thiazole biosynthesis protein ThiH; KEGG: tte:TTE1073 1.1e-10 bioB; Biotin synthase and related enzymes K01012. (373 aa) |
| | rpoC | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1407 aa) |
| | rpoB | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1350 aa) |
| | dsrH | Sulfur relay protein TusB/DsrH; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. (95 aa) |
| | tusC | Sulfur relay protein TusC/DsrF; Belongs to the DsrF/TusC family. (119 aa) |
| | tusD | Sulfur relay protein TusD/DsrE; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE. (134 aa) |
| | EFB72883.1 | HTH domain protein; KEGG: tde:TDE0041 0.00016 birA; birA bifunctional protein K03524:K01947. (232 aa) |
| | glyS | glycine--tRNA ligase, beta subunit; KEGG: plu:plu0294 0. glyS; glycyl-tRNA synthetase beta chain (glycine--TRNA ligase beta chain) (GlyRS) K01879. (689 aa) |
| | glyQ | KEGG: ypk:y4090 1.0e-161 glyQ; glycine tRNA synthetase, alpha subunit K01878; Psort location: Cytoplasmic, score: 9.97. (302 aa) |
| | rpoZ | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (91 aa) |
| | recG | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (694 aa) |
| | GlpD_1 | FAD dependent oxidoreductase; KEGG: plu:plu0194 3.8e-235 glpD; aerobic glycerol-3-phosphate dehydrogenase GlpD K00111; Psort location: Cytoplasmic, score: 9.97; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (500 aa) |
| | PoxB | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein; KEGG: ypk:y2821 4.7e-237 poxB; pyruvate oxidase K00156; Belongs to the TPP enzyme family. (574 aa) |
| | paaG | phenylacetate-CoA oxygenase, PaaG subunit; KEGG: reh:H16_A3520 8.4e-112 paaA1; phenylacetic acid degradation protein A K00455; Psort location: Cytoplasmic, score: 8.96. (312 aa) |
| | paaH | phenylacetate-CoA oxygenase, PaaH subunit. (95 aa) |
| | paaI | phenylacetate-CoA oxygenase, PaaI subunit; Psort location: Cytoplasmic, score: 8.96. (262 aa) |
| | paaK | phenylacetate-CoA oxygenase/reductase, PaaK subunit; KEGG: reh:H16_B1359 8.5e-87 paaE2; phenylacetic acid degradation protein E,flavodoxin reductase; Psort location: Cytoplasmic, score: 8.96. (362 aa) |
| | FdrA | Bacterial FdrA protein; KEGG: ape:APE_1072.1 9.6e-16 succinyl-CoA synthetase alpha chain K01902. (516 aa) |
| | EFB73028.1 | Hypothetical protein. (471 aa) |
| | dmsC | DMSO reductase, anchor subunit DmsC; KEGG: eci:UTI89_C0969 2.5e-80 dmsC; anaerobic dimethyl sulfoxide reductase subunit C K07308; Psort location: CytoplasmicMembrane, score: 10.00. (285 aa) |
| | DmsB_1 | KEGG: ecp:ECP_0909 2.8e-33 anaerobic dimethyl sulfoxide reductase, subunit B K07307; Psort location: Cytoplasmic, score: 8.96. (83 aa) |
| | FdhF_1 | Oxidoreductase alpha (molybdopterin) subunit; KEGG: eci:UTI89_C1715 7.2e-296 ydeP; hypothetical protein YdeP K00122; Psort location: Periplasmic, score: 9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (764 aa) |
| | accA-2 | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa) |
| | dnaE | KEGG: plu:plu0687 0. dnaE; DNA polymerase III alpha subunit K02337; Psort location: Cytoplasmic, score: 9.97. (1144 aa) |
| | recD | Exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (625 aa) |
| | recB | Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1201 aa) |
| | recC | Exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1124 aa) |
| | PolB | Putative DNA polymerase II; KEGG: yps:YPTB0659 5.0e-288 polB, dinA; DNA polymerase II and and 3'--> 5' exonuclease K02336. (783 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (581 aa) |
| | rpoD | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (616 aa) |
| | GsiD | ABC transporter, permease protein; KEGG: mes:Meso_1141 0.0062 V-type H(+)-translocating pyrophosphatase K01507; Psort location: CytoplasmicMembrane, score: 10.00. (270 aa) |
| | hypB | Hydrogenase accessory protein HypB; KEGG: reh:H16_A1087 8.5e-16 ureG; UreA amidohydrolase (urease) regulatory and maturation protein UreG; Psort location: Cytoplasmic, score: 9.97. (291 aa) |
| | hypA | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa) |
| | hybC | Hydrogenase-2 large chain; KEGG: ecj:JW2962 9.1e-257 hybC; hydrogenase 2, large subunit K06281; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (567 aa) |
| | HybB | KEGG: eci:UTI89_C3417 7.6e-166 hybB; probable Ni/Fe-hydrogenase 2 B-type cytochrome subunit K00178; Psort location: CytoplasmicMembrane, score: 10.00. (395 aa) |
| | FdnH_2 | Tat pathway signal sequence domain protein; KEGG: eci:UTI89_C3418 1.8e-141 hybA; hydrogenase-2 operon protein HybA precursor K00396; Psort location: Periplasmic, score: 10.00. (349 aa) |
| | hybO | Hydrogenase-2 small chain; KEGG: sbo:SBO_2866 9.9e-180 putative hydrogenase subunit K06282; Psort location: Periplasmic, score: 9.44. (372 aa) |
| | GltD | Pyridine nucleotide-disulfide oxidoreductase; KEGG: plu:plu4010 1.5e-153 gltD; glutamate synthase [NADPH] small chain (glutamate synthase beta subunit) (NADPH-GOGAT) (GLTS beta chain) K00266; Psort location: Cytoplasmic, score: 9.97. (458 aa) |
| | sspB | Stringent starvation protein B; Psort location: Cytoplasmic, score: 8.96. (164 aa) |
| | rpoN | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (481 aa) |
| | PmbA | TldD/PmbA family protein; KEGG: reh:H16_A2705 3.3e-94 pmbA; microcin-processing peptidase 1; Psort location: Cytoplasmic, score: 9.97. (446 aa) |
| | TldD | TldD/PmbA family protein; KEGG: eci:UTI89_C3675 4.2e-204 tldD; CsrA activity inhibitor TldD K03568; Psort location: Cytoplasmic, score: 9.26. (481 aa) |
| | accB | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (156 aa) |
| | accC | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (448 aa) |
| | EFB72610.1 | ATP-grasp domain protein; KEGG: mlo:mll9226 1.9e-33 argininosuccinate lyase K01755. (406 aa) |
| | KynA | KEGG: plu:plu1434 1.1e-59 hypothetical protein K00453. (231 aa) |
| | tusA | Sulfur transfer protein SirA; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin. (84 aa) |
| | glpB | Glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor. (431 aa) |
| | glpA | KEGG: ype:YPO3826 1.4e-244 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111; Psort location: Cytoplasmic, score: 9.97; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (551 aa) |
| | CsaA | Export-related chaperone CsaA; KEGG: ret:RHE_CH03014 4.1e-23 csaA; methionine--tRNA ligase protein; Psort location: Cytoplasmic, score: 9.97. (111 aa) |
| | glgC | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (440 aa) |
| | EFB72300.1 | Molybdopterin oxidoreductase Fe4S4 domain protein; KEGG: aha:AHA_2495 1.3e-60 fdhA; formate dehydrogenase, alpha subunit, selenocysteine-containing K00122. (141 aa) |
| | FdhF_2 | Formate dehydrogenase, alpha subunit; KEGG: ecc:c5625 7.7e-228 fdhF; formate dehydrogenase H K00123; Psort location: Periplasmic, score: 9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (559 aa) |
| | hypA-2 | Hydrogenase nickel insertion protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa) |
| | HycG | NADH ubiquinone oxidoreductase, 20 Kd subunit; KEGG: eca:ECA1239 2.4e-107 hyfI; hydrogenase-4 component I. (260 aa) |
| | HyfG | Respiratory-chain NADH dehydrogenase, 30 Kd subunit; KEGG: eca:ECA1241 2.3e-267 hyfG; hydrogenase-4 component G; Psort location: Periplasmic, score: 9.44. (577 aa) |
| | HyfB_1 | KEGG: eca:ECA1242 9.7e-205 hyfF; NADH dehydrogenase subunit N; Psort location: CytoplasmicMembrane, score: 10.00. (526 aa) |
| | NuoL_2 | NADH-ubiquinone/plastoquinone (complex I) family protein; KEGG: eca:ECA1244 4.5e-200 hyfD; hydrogenase 4 membrane subunit; Psort location: CytoplasmicMembrane, score: 10.00. (480 aa) |
| | EFB72329.1 | HTH domain protein. (235 aa) |
| | HolC | KEGG: plu:plu4482 1.1e-68 holC; DNA polymerase III, chi subunit K02339. (168 aa) |
| | argF | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (341 aa) |
| | pyrB | KEGG: ypa:YPA_3715 1.5e-137 aspartate carbamoyltransferase catalytic subunit K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (311 aa) |
| | pyrI | Aspartate carbamoyltransferase, regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase. (154 aa) |
| | xerC | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifically exchanges t [...] (311 aa) |
| | rhlB | DEAD/DEAH box helicase; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily. (428 aa) |
| | IlvM | Hypothetical protein; KEGG: plu:plu4684 5.7e-26 ilvM; acetolactate synthase isozyme II small subunit (AHAS-II) (acetohydroxy-acid synthase II small subunit) (ALS-II) K01653; Psort location: Cytoplasmic, score: 8.96. (89 aa) |
| | ilvB | Acetolactate synthase, large subunit, biosynthetic type; KEGG: stm:STM3901 3.4e-225 ilvG; acetolactate synthase large subunit K01652; Psort location: Cytoplasmic, score: 8.96. (548 aa) |
| | ComM | Mg chelatase-like protein; KEGG: eci:UTI89_C4322 7.7e-157 yifB; putative 2-component regulator K07391; Psort location: Cytoplasmic, score: 8.96. (508 aa) |
| | cysK | Cysteine synthase A; KEGG: sty:STY2666 3.5e-136 cysK; cysteine synthase A K01738; Belongs to the cysteine synthase/cystathionine beta- synthase family. (318 aa) |
| | cysM | Cysteine synthase B; KEGG: plu:plu1391 7.0e-124 cysM; cysteine synthase B (O-acetylserine sulfhydrolase B) K01738; Belongs to the cysteine synthase/cystathionine beta- synthase family. (304 aa) |
| | hscA | Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. Involved in the maturation of IscU. (616 aa) |
| | hscB | Fe-S protein assembly co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family. (173 aa) |
| | iscA | Iron-sulfur cluster assembly protein IscA; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system TrxA/TrxB. (135 aa) |
| | iscU | FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters. (128 aa) |
| | iscS | Cysteine desulfurase IscS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. (404 aa) |
| | nadE | NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (540 aa) |
| | EFB71980.1 | Phage uncharacterized protein domain protein; Psort location: Cytoplasmic, score: 8.96. (469 aa) |
| | YfhL | Hypothetical protein; KEGG: mth:MTH400 0.0017 polyferredoxin K00284:K00392. (73 aa) |
| | rpoE | KEGG: reh:H16_A2563 4.9e-59 rpoE1; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. ECF subfamily. (192 aa) |
| | EFB72050.1 | Hypothetical protein. (511 aa) |
| | EFB72059.1 | Hypothetical protein; KEGG: xac:XAC2899 2.3e-61 type I restriction-modification system specificity determinant K01154. (435 aa) |
| | EFB72060.1 | KEGG: vch:VC1769 0. DNA methylase HsdM, putative K03427; Psort location: Cytoplasmic, score: 8.96. (821 aa) |
| | EFB72061.1 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (307 aa) |
| | radC | DNA repair protein RadC; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0758 family. (166 aa) |
| | EFB72111.1 | Transposase. (134 aa) |
| | EFB72114.1 | Hypothetical protein. (111 aa) |
| | EFB72115.1 | Hypothetical protein; KEGG: nwi:Nwi_0782 4.6e-07 integrase, catalytic region K00986. (94 aa) |
| | xerD | Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerC binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerD specifically exchanges t [...] (300 aa) |
| | gcvP | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (968 aa) |
| | gcvH | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (130 aa) |
| | gcvT | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine. (364 aa) |
| | lpdA | Dihydrolipoyl dehydrogenase; KEGG: eca:ECA3787 5.8e-239 lpdA, lpd; dihydrolipoamide dehydrogenase K00382; Psort location: Cytoplasmic, score: 9.97. (476 aa) |
| | aceF | Dihydrolipoyllysine-residue acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (620 aa) |
| | aceE | Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (888 aa) |
| | ilvN | KEGG: ypk:y3639 1.3e-74 ilvH; acetolactate synthase small subunit K01653; Psort location: Cytoplasmic, score: 8.96. (173 aa) |
| | ilvB-2 | Acetolactate synthase, large subunit, biosynthetic type; KEGG: plu:plu3666 2.6e-259 ilvI; acetolactate synthase isozyme III large subunit (AHAS-III) (acetohydroxy-acid synthase III large subunit) (ALS-III) K01652. (575 aa) |
| | leuC | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (467 aa) |
| | leuD | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (200 aa) |
| | Hcr | 2Fe-2S iron-sulfur cluster binding domain protein; KEGG: eca:ECA2663 4.8e-116 hcr; NADH oxidoreductase. (361 aa) |
| | dnaX | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (648 aa) |
| | eno | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (433 aa) |
| | dgt | Putative dGTPase; dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs; Belongs to the dGTPase family. Type 1 subfamily. (507 aa) |
| | folK | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; KEGG: plu:plu0873 6.1e-61 folK; 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950. (160 aa) |
| | Tpd | Hypothetical protein. (200 aa) |
| | EfeU | FTR1 family protein; Psort location: CytoplasmicMembrane, score: 10.00. (285 aa) |
| | EFB71858.1 | Imelysin. (295 aa) |
| | mdlC | KEGG: msm:MSMEG_1606 3.3e-149 benzoylformate decarboxylase K01576; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the TPP enzyme family. (543 aa) |
| | mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (855 aa) |
| | cysC | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. (207 aa) |
| | cysN | Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (480 aa) |
| | cysD | KEGG: plu:plu0709 1.4e-148 cysD; sulfate adenylyltransferase subunit 2 (sulfate adenylate transferase) (SAT) (ATP-sulfurylase small subunit) K00957; Psort location: Cytoplasmic, score: 8.96. (317 aa) |
| | EFB71903.1 | Pyridine nucleotide-disulfide oxidoreductase; KEGG: pto:PTO1227 1.6e-28 sulfide dehydrogenase (flavocytochrome c); Psort location: Cytoplasmic, score: 8.96. (395 aa) |
| | holE | KEGG: eca:ECA2475 2.4e-27 holE; DNA polymerase III, theta subunit K02345. (76 aa) |
| | guaB | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (488 aa) |
| | xseA | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (455 aa) |
| | ppk1 | Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (689 aa) |
| | YetF | Hypothetical protein. (211 aa) |
| | Ndh | Pyridine nucleotide-disulfide oxidoreductase; KEGG: plu:plu2821 7.9e-187 ndh; NADH dehydrogenase K03885. (434 aa) |
| | holB | DNA polymerase III, delta' subunit; KEGG: plu:plu2827 8.5e-103 holB; DNA-directed DNA polymerase III delta' chain K02341. (330 aa) |
| | DmsC_2 | Hypothetical protein; KEGG: dsy:DSY0599 1.1e-22 dmsC; putative anaerobic DMSO reductase chain C anchor subunit K00369; Psort location: CytoplasmicMembrane, score: 10.00. (272 aa) |
| | DmsB_2 | KEGG: dsy:DSY2331 8.3e-41 dmsB; putative anaerobic DMSO reductase chain B iron-sulfur subunit K00369. (161 aa) |
| | EFB71267.1 | Helicase C-terminal domain protein; KEGG: eci:UTI89_C2461 1.2e-231 yejH; hypothetical protein YejH K01529. (591 aa) |
| | dmsB | Dimethylsulfoxide reductase, chain B; KEGG: spt:SPA4124 1.5e-80 dmsB; anaerobic dimethyl sulfoxide reductase subunit B K00397. (205 aa) |
| | dmsC-2 | DMSO reductase, anchor subunit DmsC; KEGG: ypm:YP_2592 1.5e-75 dmsC2; anaerobic dimethyl sulfoxide reductase subunit B K00397; Psort location: CytoplasmicMembrane, score: 10.00. (258 aa) |
| | AccC_1 | Carbamoyl-phosphate synthase L chain, ATP binding domain protein; KEGG: plu:plu4306 1.2e-208 unnamed protein product; similar to biotin carboxylase K01946; Psort location: Cytoplasmic, score: 8.96. (580 aa) |
| | NrdA | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (763 aa) |
| | NrdB | KEGG: plu:plu3053 2.0e-188 nrdB; ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide reductase 1) (B2 protein) (R2 protein) K00526; Psort location: Cytoplasmic, score: 8.96. (380 aa) |
| | NuoM | Proton-translocating NADH-quinone oxidoreductase, chain M; KEGG: plu:plu3078 1.0e-186 nuoM; NADH dehydrogenase I chain M (NADH-ubiquinone oxidoreductase chain M) (NUO13) K00342; Psort location: CytoplasmicMembrane, score: 10.00. (507 aa) |
| | NuoL_1 | Proton-translocating NADH-quinone oxidoreductase, chain L; KEGG: plu:plu3079 2.6e-250 nuoL; NADH dehydrogenase I chain L (NADH-ubiquinone oxidoreductase chain L) (NUO12) K00341; Psort location: CytoplasmicMembrane, score: 10.00. (618 aa) |
| | nuoJ | NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (180 aa) |
| | nuoG | NADH dehydrogenase (quinone), G subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (910 aa) |
| | nuoF | NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (453 aa) |
| | NuoE | KEGG: plu:plu3086 1.4e-70 nuoE; NADH dehydrogenase I chain E (NADH-ubiquinone oxidoreductase chain 5) (NUO5) K00334; Psort location: Cytoplasmic, score: 9.97. (179 aa) |
| | nuoD | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family. (600 aa) |
| | nuoA | Putative NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (147 aa) |
| | YfbT | HAD hydrolase, family IA, variant 3; KEGG: ypn:YPN_2155 2.6e-62 haloacid dehalogenase-like hydrolase K01112. (231 aa) |
| | accD | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (323 aa) |
| | recA | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (355 aa) |
| | dinB | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (351 aa) |
| | EFB71093.1 | KEGG: reh:H16_A0476 3.5e-65 predicted glutamine amidotransferase class II. (255 aa) |
| | trmB | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (238 aa) |
| | oxc | oxalyl-CoA decarboxylase; KEGG: ecj:JW2370 6.6e-222 oxc; predicted oxalyl-CoA decarboxylase K01577; Belongs to the TPP enzyme family. (567 aa) |
| | dnaQ | DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (253 aa) |
| | clpX | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (425 aa) |
| | cyoC | KEGG: plu:plu3877 9.5e-88 cyoC; cytochrome O ubiquinol oxidase subunit III (ubiquinol oxidase chain C) K02299; Psort location: CytoplasmicMembrane, score: 10.00. (204 aa) |
| | cyoD | KEGG: eci:UTI89_C0452 5.9e-40 cyoD; cytochrome o ubiquinol oxidase protein CyoD K02300; Psort location: CytoplasmicMembrane, score: 10.00. (110 aa) |
| | xseB | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (83 aa) |
| | ribH | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. (157 aa) |
| | TsaA | Antioxidant, AhpC/TSA family; KEGG: plu:plu3907 2.4e-98 ahpC; alkyl hydroperoxide reductase, small subunit (antioxidant) K03386; Psort location: Cytoplasmic, score: 9.97. (200 aa) |
| | YedF | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the sulfur carrier protein TusA family. (79 aa) |
| | carB | KEGG: yps:YPTB0624 0. carB, arg, cap, pyrA; carbamoyl-phosphate synthase, large subunit K01955; Psort location: Cytoplasmic, score: 8.96; Belongs to the CarB family. (1073 aa) |
| | carA | KEGG: eci:UTI89_C0036 2.1e-177 carA; carbamoyl-phosphate synthase small chain K01956; Psort location: Cytoplasmic, score: 8.96; Belongs to the CarA family. (396 aa) |
| | NadR | Nicotinamide-nucleotide adenylyltransferase; KEGG: plu:plu0553 4.6e-191 nadR; transcriptional regulator NadR K00952:K06210:K06211. (412 aa) |
| | rimI | KEGG: plu:plu4250 2.2e-47 rimI; ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S18) K03789; Psort location: Cytoplasmic, score: 9.26. (156 aa) |
| | HolD | Putative DNA polymerase III, psi subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown. (136 aa) |
| | IlvN | KEGG: eca:ECA3849 2.2e-26 ilvN; acetolactate synthase isozyme I small subunit K01653; Psort location: Cytoplasmic, score: 8.96. (94 aa) |
| | ilvB-3 | Acetolactate synthase, large subunit, biosynthetic type; KEGG: eca:ECA3848 2.7e-216 ilvB; acetolactate synthase isozyme I large subunit K01652. (570 aa) |
| | uvrA | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (944 aa) |
| | KynB | Putative cyclase; Psort location: Cytoplasmic, score: 8.96. (260 aa) |
| | EFB70647.1 | Hypothetical protein. (201 aa) |
| | SigK | Sigma-70 region 2; KEGG: reh:H16_A2923 1.2e-25 rpoE4; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.96; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa) |
| | dnaN | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (366 aa) |
| | rnpA | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (119 aa) |
| | fdoG | KEGG: ecs:ECs4820 2.1e-92 formate dehydrogenase-O major subunit K00123; Psort location: Periplasmic, score: 9.44. (195 aa) |
| | EFB70687.1 | KEGG: yps:YPTB3927 0. fdoG; formate dehydrogenase-O, major subunit (formate dehydrogenase) K00123; Psort location: Periplasmic, score: 9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (803 aa) |
| | fdxH-2 | Formate dehydrogenase, beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (312 aa) |
| | FdoI | KEGG: plu:plu4889 5.5e-92 fdoI; formate dehydrogenase, cytochrome B556(FDO) subunit (formate dehydrogenase-O gamma subunit) (FDH-Z gamma subunit) (aerobic formate dehydrogenase cytochrome B556 subunit) K00127; Psort location: CytoplasmicMembrane, score: 10.00. (218 aa) |
| | EFB70697.1 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; overlaps another CDS with the same product name. (143 aa) |
| | EFB70698.1 | Hypothetical protein; Overlaps another CDS with the same product name. (62 aa) |
| | rph | tRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (237 aa) |
| | coaBC | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (423 aa) |
| | radC-2 | DNA repair protein RadC; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0758 family. (234 aa) |
| | gpsA | KEGG: plu:plu4838 1.7e-145 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) K00057; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (342 aa) |
| | cysE | KEGG: ypm:YP_0070 3.4e-122 cysE; serine acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.26. (273 aa) |
| | hslV | ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (176 aa) |
| | hslU | ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (444 aa) |
| | pfkA | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (325 aa) |
| | rpoA | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (329 aa) |
| | EFB74021.1 | KEGG: sac:SACOL0346 1.9e-11 prophage L54a, N-6-adenine-methyltransferase K00571. (214 aa) |
| | hisH | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (197 aa) |
| | moeB | KEGG: eci:UTI89_C0829 1.4e-95 moeB; molybdopterin biosynthesis protein MoeB K03751; Psort location: Cytoplasmic, score: 8.96. (251 aa) |
| | moaE | Molybdopterin converting factor, subunit 2. (150 aa) |
| | moaD | Molybdopterin converting factor, subunit 1. (81 aa) |
| | uvrB | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (672 aa) |
| | sucD | succinate-CoA ligase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (290 aa) |
| | sucC | succinate-CoA ligase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (388 aa) |
| | sucB | Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (401 aa) |
| | sucA | KEGG: plu:plu1430 0. sucA; 2-oxoglutarate dehydrogenase E1 component (alpha-ketoglutarate dehydrogenase) K00164; Psort location: Cytoplasmic, score: 9.26. (935 aa) |
| | sdhC | KEGG: spt:SPA2011 1.7e-49 sdhC; succinate dehydrogenase cytochrome b-556 subunit K00241; Psort location: CytoplasmicMembrane, score: 10.00. (129 aa) |
| | holA | KEGG: eca:ECA1307 6.3e-130 holA; DNA polymerase III, delta subunit K02340. (344 aa) |
| | NrdE | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (710 aa) |
| | NrdF2 | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (323 aa) |
| | trpD | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (340 aa) |
| | EFB73639.1 | Acetyltransferase, GNAT family; KEGG: fnu:FN1294 1.1e-22 ribosomal-protein-alanine acetyltransferase K00676. (182 aa) |
| | accA | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (319 aa) |
| | EFB73701.1 | Hypothetical protein. (886 aa) |
| | ahpF | KEGG: ecp:ECP_0639 1.7e-216 alkyl hydroperoxide reductase subunit F K03387; Psort location: Cytoplasmic, score: 9.97. (524 aa) |
| | ahpC | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (210 aa) |
| | pyk | Pyruvate kinase; KEGG: plu:plu2118 4.1e-222 pykA; pyruvate kinase II K00873; Psort location: Cytoplasmic, score: 8.96. (480 aa) |
| | ruvB | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (336 aa) |
| | ruvA | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (205 aa) |
| | ruvC | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (181 aa) |
| | prs | Ribose-phosphate diphosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (312 aa) |
| | pyk-2 | Pyruvate kinase; KEGG: plu:plu2613 6.5e-208 pykF; pyruvate kinase I (PK-1) K00873; Belongs to the pyruvate kinase family. (470 aa) |
| | sufA | FeS assembly scaffold SufA; Psort location: Cytoplasmic, score: 8.96; Belongs to the HesB/IscA family. (153 aa) |
| | pheT | phenylalanine--tRNA ligase, beta subunit; KEGG: plu:plu2664 0. pheT; phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain) K01890; Psort location: Cytoplasmic, score: 9.97. (795 aa) |
| | pheS | phenylalanine--tRNA ligase, alpha subunit; KEGG: yps:YPTB2337 2.0e-158 pheS; phenylalanyl-tRNA synthetase alpha chain K01889; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (327 aa) |
| | uvrC | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (610 aa) |
| | dpiA | Transcriptional regulatory protein DpiA; KEGG: btk:BT9727_0488 1.0e-26 response regulator K07703; Psort location: Cytoplasmic, score: 9.97. (227 aa) |
| | EFB73224.1 | Alkylhydroperoxidase AhpD family core domain protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (113 aa) |
| | fliA | Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily. (242 aa) |
| | FdnI | Formate dehydrogenase, gamma subunit; KEGG: ecj:JW1472 2.3e-100 fdnI; formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible K08350; Psort location: CytoplasmicMembrane, score: 10.00. (219 aa) |
| | fdxH | Formate dehydrogenase, beta subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (293 aa) |
| | EFB73373.1 | KEGG: eci:UTI89_C1689 0. fdnG; FdnG, alpha subunit of formate dehydrogenase-N K08348; Psort location: Periplasmic, score: 9.44; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (803 aa) |
| | EFB73374.1 | Tat pathway signal sequence domain protein; KEGG: spt:SPA1298 9.2e-90 fdnG; putative molybdopterin oxidoreductases K08348; Psort location: Periplasmic, score: 9.44. (195 aa) |
| | EFB73468.1 | NlpC/P60 family protein; Psort location: Cytoplasmic, score: 8.96. (242 aa) |
| | EFB73476.1 | KilA-N domain protein. (255 aa) |
