STRINGSTRING
Hoch_2240 Hoch_2240 Hoch_6739 Hoch_6739 Hoch_3369 Hoch_3369 Hoch_3028 Hoch_3028 Hoch_2006 Hoch_2006 Hoch_1841 Hoch_1841 Hoch_1498 Hoch_1498 Hoch_0403 Hoch_0403 Hoch_0402 Hoch_0402
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hoch_2240Conserved hypothetical protein; KEGG: proteophosphoglycan 5. (3036 aa)
Hoch_6739PFAM: basic membrane lipoprotein; KEGG: tau:Tola_1372 basic membrane lipoprotein. (360 aa)
Hoch_3369PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: sfu:Sfum_2944 3-hydroxyisobutyrate dehydrogenase. (303 aa)
Hoch_3028PFAM: sodium/hydrogen exchanger; KEGG: hch:HCH_01176 NhaP-type Na+/H+ and K+/H+ antiporter. (421 aa)
Hoch_2006PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: bbt:BBta_4223 putative lipase/esterase. (352 aa)
Hoch_1841PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: pla:Plav_0445 alpha/beta hydrolase domain- containing protein. (347 aa)
Hoch_1498PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; KEGG: bra:BRADO6191 putative 3-hydroxyisobutyrate dehydrogenase family protein. (284 aa)
Hoch_0403PFAM: band 7 protein; SMART: band 7 protein; KEGG: flot1b; flotillin 1b; K07192 flotillin. (430 aa)
Hoch_0402PFAM: band 7 protein; SMART: band 7 protein; KEGG: hypothetical protein. (473 aa)
Your Current Organism:
Haliangium ochraceum
NCBI taxonomy Id: 502025
Other names: H. ochraceum DSM 14365, Haliangium ochraceum DSM 14365, Haliangium ochraceum SMP-2, Haliangium ochraceum str. DSM 14365, Haliangium ochraceum strain DSM 14365, myxobacterium SMP-2
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